SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K23L20.9 (Universal genetic code) : 541 aa
 vs  library
 searching gi:2660673 library

    541 residues in     1 sequences
The best scores are:                              s-w
gi|2660673                                         (541)4028

>>gi|2660673                                         (541 aa)
Smith-Waterman score: 4028;   100.000% identity in 541 aa overlap

               10        20        30        40        50        60
K23L20 MSKLMLPFHEHPMTISNLYNHACDFCPGRPKPGTIFFCEKCDLDLHKGCAGKFLNNSSRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 MSKLMLPFHEHPMTISNLYNHACDFCPGRPKPGTIFFCEKCDLDLHKGCAGKFLNNSSRC
               10        20        30        40        50        60

               70        80        90       100       110       120
K23L20 NHSLKIFQGRFGQFGEDDDYQCHYCQQNVGFHFARCTICNISIDEKCLRNPPPLTIFQPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 NHSLKIFQGRFGQFGEDDDYQCHYCQQNVGFHFARCTICNISIDEKCLRNPPPLTIFQPK
               70        80        90       100       110       120

              130       140       150       160       170       180
K23L20 HHKHSLFLLGRLVAFTCNACGVEGDRNPYICIECNLMLHKECTDLPRVISINRHEHRISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 HHKHSLFLLGRLVAFTCNACGVEGDRNPYICIECNLMLHKECTDLPRVISINRHEHRISH
              130       140       150       160       170       180

              190       200       210       220       230       240
K23L20 TFHLGKGEGVWECGVCRKTIDCVYGAFICSRCPSSYAVHSRCATRKEVWDGIELEDVPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 TFHLGKGEGVWECGVCRKTIDCVYGAFICSRCPSSYAVHSRCATRKEVWDGIELEDVPEE
              190       200       210       220       230       240

              250       260       270       280       290       300
K23L20 DEELEDPFKVINEKGDIVHFSHEEHVLRLDVNYVHDNDTMCCGGCILPINDDPCYKCVEC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 DEELEDPFKVINEKGDIVHFSHEEHVLRLDVNYVHDNDTMCCGGCILPINDDPCYKCVEC
              250       260       270       280       290       300

              310       320       330       340       350       360
K23L20 DFCLHKGCASLPRKKAHFLHNHKISLRAHKDDVYVDKCGACKTYSNGFKYECHDKSSCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 DFCLHKGCASLPRKKAHFLHNHKISLRAHKDDVYVDKCGACKTYSNGFKYECHDKSSCRG
              310       320       330       340       350       360

              370       380       390       400       410       420
K23L20 NIKYDIRCSSISEPFHHDDLHPHPLYWTLEETKQCKACGTEILKPLSCLVCEYALCIRCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 NIKYDIRCSSISEPFHHDDLHPHPLYWTLEETKQCKACGTEILKPLSCLVCEYALCIRCA
              370       380       390       400       410       420

              430       440       450       460       470       480
K23L20 TLPKKVKHRCDDHFLSLCHDAGNSSGDLWCDICETKTDPSVCYYTCDKCGVSLHINCVLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 TLPKKVKHRCDDHFLSLCHDAGNSSGDLWCDICETKTDPSVCYYTCDKCGVSLHINCVLG
              430       440       450       460       470       480

              490       500       510       520       530       540
K23L20 DLYYTKVGLVYPGLEVLPNNGATRPFCNSCKVRCKFSFLMKQTLGDLVRYFCSIRCIPRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 DLYYTKVGLVYPGLEVLPNNGATRPFCNSCKVRCKFSFLMKQTLGDLVRYFCSIRCIPRA
              490       500       510       520       530       540

        
K23L20 R
       :
gi|266 R
        

Library scan:  0:00:00  total CPU time:  0:00:00