SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K23L20.11 (Universal genetic code) : 440 aa
 vs  library
 searching gi:2660671 library

    395 residues in     1 sequences
The best scores are:                              s-w
gi|2660671                                         (395)2505

>>gi|2660671                                         (395 aa)
Smith-Waterman score: 2505;   97.927% identity in 386 aa overlap

               10        20        30        40        50        60
K23L20 MNLISRTLTRAVSSSLYHSKAAKLPTQKWIISQQIRVFSATVISGGGKKPLAKVSVKPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 MNLISRTLTRAVSSSLYHSKAAKLPTQKWIISQQIRVFSATVISGGGKKPLAKVSVKPPL
               10        20        30        40        50        60

               70        80        90       100       110       120
K23L20 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSN
               70        80        90       100       110       120

              130       140       150       160       170       180
K23L20 FWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 FWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA
              130       140       150       160       170       180

              190       200       210       220       230       240
K23L20 TSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 TSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLV
              190       200       210       220       230       240

              250       260       270       280       290       300
K23L20 KPGHPDFKMKVGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 KPGHPDFKMKVGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQN
              250       260       270       280       290       300

              310       320       330       340       350       360
K23L20 PDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|266 PDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQL
              310       320       330       340       350       360

              370       380       390       400       410       420
K23L20 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGDSP
       :::::::::::::::   : ..:  :                                  
gi|266 ELDVEVPKGNLKQLKTS-I-RQLCGNCDGLISLNEPL                       
              370         380       390                            

              430       440
K23L20 TWALSKLPPLKKNQERPVMA

Library scan:  0:00:00  total CPU time:  0:00:00