SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K21P3.P2 (Universal genetic code) : 233 aa
 vs  library
 searching gnl:PID:d1032113 library

    526 residues in     1 sequences
The best scores are:                              s-w
gnl|PID|d1032113                                   (526) 243

>>gnl|PID|d1032113                                   (526 aa)
Smith-Waterman score: 243;   30.222% identity in 225 aa overlap

gnl|PI MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVP
               10        20        30        40        50        60

gnl|PI ASAATGVDKKLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRF
               70        80        90       100       110       120

gnl|PI VQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVW
              130       140       150       160       170       180

                                                         10        
K21P3.                                           KGIEKIQNLQQHGSYEVD
                                                              :.:  
gnl|PI ALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQT
              190       200       210       220       230       240

       20            30        40        50        60        70    
K21P3. KKAL----KILQTYLKKSLRYVCLAISYLCDGSEAVIQSVIEAGFDPKLVEVLQRPSPDV
       . ::    .....  .. :  .: :.::: ::..  ::.:::::  :.:::.: .:::.:
gnl|PI RPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSV
              250       260       270       280       290       300

           80                90       100       110            120 
K21P3. LAPVLHNIGTI-----AR-Q--YNHQSQALQNNFSSRLLMQIFHRWSI-----WLNMLNL
       : :.:...:.:     :. :   .:  :::   .:  :: : ... ::     : .. :.
gnl|PI LIPALRTVGNIVTGDDAQTQCIIDH--QALPCLLS--LLTQNLKK-SIKKEACW-TISNI
              310       320         330         340         350    

                130          140             150         160       
K21P3. T---RKKLHGHFE---MPPWVVLLIKSSTSD----TWW--SRVAQ--NFYVISWYVQMSS
       :   . .... ..   . : : :: ...  :    . :  : ...  .   :. :. .: 
gnl|PI TAGNKDQIQAVINAGIIGPLVNLL-QTAEFDIKKEAAWAISNATSGGSHDQIK-YL-VSE
          360       370        380       390       400         410 

       170         180       190        200       210       220    
K21P3. QCV--LMGWKTFKPERRQITQETSTVIAN-LKMRKESKRLRTCKNTKAWRSTRRLRFWRQ
        :.  :     . :. : .:      . : ::. . .: :                    
gnl|PI GCIKPLCDL-LICPDIRIVTVCLEG-LENILKVGETDKTLAAGDVNVFSQMIDEAEGLEK
             420        430        440       450       460         

          230                                                   
K21P3. TGVRMLRSG                                                
                                                                
gnl|PI IENLQSHDNNEIYEKAVKILEAYWMDEEDDTMGATTVAAPQGATFDFGQGGGAAQFK
     470       480       490       500       510       520      

Library scan:  0:00:00  total CPU time:  0:00:00