SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K21P3.14 (Universal genetic code) : 342 aa
 vs  library
 searching gi:2529681 library

    371 residues in     1 sequences
The best scores are:                              s-w
gi|2529681                                         (371) 943

>>gi|2529681                                         (371 aa)
Smith-Waterman score: 943;   46.111% identity in 360 aa overlap

               10        20        30        40        50        60
K21P3. MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY
       :::::::::.:.::::::::::.::..:::.:::::::::::.::: :::::::::::::
gi|252 MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY
               10        20        30        40        50        60

               70        80        90       100       110       120
K21P3. LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT
       :: :::::::: .:::..::::: ::::::::: :::::::::::::::::::::.. : 
gi|252 LRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFI
               70        80        90       100       110       120

                 130       140       150       160         170     
K21P3. ---AVSGDGHNLLVNDVVLKKSCSSSSGAKNNNKTKKKKKGRTSRSSMK-K-HKQMVTAS
          ..: :     :. :..    ...:.:    ..:..  ::::::.:: : :.  .  .
gi|252 RKPSISQD-----VSAVIM----TNASSAPPPPQAKRRL-GRTSRSAMKPKIHRTKTRKT
                   130           140       150        160       170

         180       190       200       210       220          230  
K21P3. QCFSQPKELESDFSEGGQNGNFEGESLGPYEWLDGELERLLSSCVW---ECTSEEAVIGV
       .  : : : ..: . :...  .  :: :  :   .:: :    : .   .:.  . ....
gi|252 KKTSAPPEPNADVA-GADKEALMVESSGA-E---AELGR---PCDYYGDDCN--KNLMSI
              180        190           200          210         220

             240       250            260       270       280      
K21P3. N-DEKVCESGDNSSCCVNLF--EEEQG---SETKIGHVGITEVDHDMTVEREREGS--FL
       : :. :    :.    ..:.  : . :   ..:  :  :  :. :..   :. ::.  : 
gi|252 NGDNGVLTFDDD---IIDLLLDESDPGHLYTNTTCGGDG--EL-HNI---RDSEGARGF-
              230          240       250          260          270 

           290       300           310             320         330 
K21P3. SSNS-NENNDKDWWVGLCNSSE--VGFG--V-D---EELLDWE--FQ-GNVTCQSDD-LW
        :.. :..:  :  .  : : :  ...   : :   .:..::.  .: :     ::. ::
gi|252 -SDTWNQGN-LDCLLQSCPSVESFLNYDHQVNDASTDEFIDWDCVWQEG-----SDNNLW
                280       290       300       310            320   

             340                                       
K21P3. DLSDIGEITLE                                     
                                                       
gi|252 HEKENPDSMVSWLLDGDDEATIGNSNCENFGEPLDHDDESALVAWLLS
           330       340       350       360       370 

Library scan:  0:00:00  total CPU time:  0:00:00