SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K21P3.11 (Universal genetic code) : 139 aa
 vs  library
 searching gi:2191172 library

    550 residues in     1 sequences
The best scores are:                              s-w
gi|2191172                                         (550) 308

>>gi|2191172                                         (550 aa)
Smith-Waterman score: 308;   41.791% identity in 134 aa overlap

gi|219 MERSRSETPSSRSRLKLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFS
               10        20        30        40        50        60

gi|219 SSRVELVPLNADFTEESWTVEGFNRNILTQREGKRPLLTGDLTVMLKNGVGVITGDIAFS
               70        80        90       100       110       120

gi|219 DNSSWTRSRKFRLGAKLTGDGAVEARSEAFGCRDQRGEWVSKKTWNTIVSHAMDCVLDET
              130       140       150       160       170       180

gi|219 ECYIYNANTPGVTLLFNSVYELIRVSFNGNDIQNLDQPILDQLKAEAYQNLNRITAVNDR
              190       200       210       220       230       240

gi|219 TFVGHPQRSLQCPQDPGFVVTCSGSQHIDFQGSLDPSSSSMALCHKASSSTVHPDVLMSF
              250       260       270       280       290       300

gi|219 DNSSTARFHIDKKFLPTFGNSFKVSELDQVHGKSQTVVTKGCIENNEEDENAFSYHHHDD
              310       320       330       340       350       360

gi|219 MTSSWSPGTHQAVETMFLTVSETEEAGMFDVHFANVNLGSPRARWCKVKAAFKVRAAFKE
              370       380       390       400       410       420

                       10        20        30        40        50  
K21P3.         MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGG
                     :.:  .:  ...:   : :...: .    . :..: :.:::.::::
gi|219 VRRHTTARNPREGLKLLSCSSSYVSVR---MKEEKGT-I----RCCSECKTTKTPMWRGG
              430       440          450            460       470  

             60        70         80        90       100       110 
K21P3. PVGPKSLCNACGIRNRKKRRGGTED-NKKLKKSSSGGGNRKFGESLKQSLMDLGIRKRST
       :.::::::::::::.::.::  .:  . .. .: .. ...:.  .: .:    :.    .
gi|219 PTGPKSLCNACGIRHRKQRR--SELLGIHIIRSHKSLASKKI--NLLSSSHG-GV----A
            480       490         500       510         520        

             120       130         
K21P3. VEKQRQKLGEEEQAAVLLMALSYGSVYA
       : :.:..: ::::::. :. :: .:: :
gi|219 V-KKRRSLKEEEQAALCLLLLSCSSVLA
            530       540       550

Library scan:  0:00:00  total CPU time:  0:00:00