SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.P2 (Universal genetic code) : 422 aa
 vs  library
 searching atac00300013 library

    434 residues in     1 sequences
The best scores are:                              s-w
ATAC00300013, 434 bases, 69F checksum.             (434) 335

>>ATAC00300013, 434 bases, 69F checksum.             (434 aa)
Smith-Waterman score: 335;   29.297% identity in 256 aa overlap

               10        20        30        40        50        60
K1F13. MPISDVASLVGGAALGAPLSEIFKLVIEEAKKVKDFKPLSQDLASTMERLVPIFNEIDMM

               70        80        90       100       110       120
K1F13. QQGSNRGTSELKVLTETMERAGEMVHKCSRIQWYSIAKKALYTREIKAINQDFLKFCQIE

              130       140       150       160       170       180
K1F13. LQLIQHRNQLQYMRSMGMASVSTKADLLSDIGNEFSKLCLVAQPEVVTKFWLKRPLMELK
                                                                   
ATAC00                                                   MDSSSSSSSS
                                                                 10

              190        200       210       220        230        
K1F13. KMLFEDGVVTVV-VSAPYALGKTTLVTKLCHDADVKEKFKQIFFISVSK-FPNVRLIGHK
             ::. :  .: :  .:..   ..  .  : : :.: . .  ::: : .    :  
ATAC00 SPSSSYGVARVSHISNPCIFGEVGSSSSSTYR-D-K-KWKLMKW--VSKLFKSGS-NGGG
               20        30        40           50          60     

      240       250        260        270       280       290      
K1F13. LLEHIGCKANEYENDLDAMLY-IQ-QLLKQLGRNGSILLVLDDVWAEEESLLQKFL-IQL
          : . .  ....: . :.. .  . : . .: :.      :   .::  :.. . ..:
ATAC00 SGAHTNHHPPQFQED-ENMVFPLPPSSLDDRSR-GA-----RD---KEE--LDRSISLSL
           70         80        90             100            110  

                300        310           320       330       340   
K1F13. PD-------YKI-LVTSRFEFTSFGPTFH--LKP--LIDDEVECRDEIEENEKLPEVNPP
        :       :   . ..: .:    : ::  :.:  .:    :   . .. ...      
ATAC00 ADNTKRPHGYGWSMDNNR-DFPR--P-FHGGLNPSSFIPP-YEPSYQYRRRQRI------
            120       130           140        150       160       

           350       360       370       380          390       400
K1F13. LSMCGGCNSAVKHEESVNILGVLWHPGCFCCRSCDKPIAIHELE-NH--MKTYNIHPFWE
          :::::: .   . .. .:...:: :: :.::   :. ::.  :   .  :  ::::.
ATAC00 ---CGGCNSDIGSGNYLGCMGTFFHPECFRCHSCGYAITEHEIPTNDAGLIEYRCHPFWN
                170       180       190       200       210        

              410       420                                        
K1F13. ERYCPVHEADGTPKCCSCERLE                                      
       ..::: :: : : .::::::::                                      
ATAC00 QKYCPSHEYDKTARCCSCERLESWDVRYYTLEDGRSLCLECMETAITDTGECQPLYHAIR
      220       230       240       250       260       270        

ATAC00 DYYEGMYMKLDQQIPMLLVQREALNDAIVGEKNVLRRPRLGAHRLVGFRNLNPEVEEGIC
      280       290       300       310       320       330        

ATAC00 QVLSYMWLESEVLSDPSTRNLPSTSSVATSSSSSFSNKKGGKSNVEKKLGEFFKHQIAHD
      340       350       360       370       380       390        

ATAC00 ASPAYGGGFRAANAAACKYGLRRTLDHIRLTGTFPL
      400       410       420       430    

Library scan:  0:00:00  total CPU time:  0:00:00