SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.P1 (Universal genetic code) : 208 aa
 vs  library
 searching atac00253527 library

    353 residues in     1 sequences
The best scores are:                              s-w
ATAC00253527, 353 bases, 1037 checksum.            (353) 598

>>ATAC00253527, 353 bases, 1037 checksum.            (353 aa)
Smith-Waterman score: 598;   46.330% identity in 218 aa overlap

ATAC00 MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE
               10        20        30        40        50        60

ATAC00 IGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRF
               70        80        90       100       110       120

                                10        20        30        40   
K1F13.                  KLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLV
                        ::..  ..:: :... :.::. ::.:.:::. . ::.::..: 
ATAC00 DICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLY
              130       140       150       160       170       180

            50        60        70        80        90       100   
K1F13. ADVKFVMDVSKREFVPPPKVDSSVIRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMF
       : :. .. :.: .: :::::::::.:: :..  :.:: .:: .: :.:: .:::::::.:
ATAC00 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIF
              190       200       210       220       230       240

             110            120        130               140       
K1F13. RQKK--KVME-----LQSLSAGRHGSNVE-VMNQTG---GD-S----DSDVEEDGKDDLL
       .::.  ...:     ::.. :. . .: : ..: :.   :: :    :.: : :  :: .
ATAC00 KQKSVLSMLEKNFKTLQAVLASLQ-NNGEPALNTTSMDLGDQSMGMEDDDNEMD--DDDM
              250       260        270       280       290         

       150             160       170       180       190       200 
K1F13. CLDT---DA---SMFKERVIEILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITS
        .:    :.   : :::.:...:. .:::::: ::::..:.:.::::::..:: :     
ATAC00 EMDEGEGDGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFT    
       300       310       320       330       340       350       

              
K1F13. LQMDLHE

Library scan:  0:00:00  total CPU time:  0:00:00