SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.19 (Universal genetic code) : 156 aa
 vs  library
 searching atap219 library

    144 residues in     1 sequences
The best scores are:                              s-w
ATAP219, 144 bases, 121E checksum.                 (144) 425

>>ATAP219, 144 bases, 121E checksum.                 (144 aa)
Smith-Waterman score: 425;   49.333% identity in 150 aa overlap

               10        20        30        40        50        60
K1F13. MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV
                                ::..::::  .: : :  :.::::.:::::::.:.
ATAP21                         MEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI
                                       10        20        30      

               70        80        90       100               110  
K1F13. AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVG--------WVS--
       ...:::. ::.::.::: :: .::.::::::::::::::: ..:: :         ::  
ATAP21 SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRRKCVEPIVSDK
         40        50        60        70        80        90      

                     120       130       140         150      
K1F13. -------GDDDVTTSEKTYQKKNIAGVKTNGGGGRGCGKGKRR--FTANLSTIAE
              ::: : ..  . ..:    :. :: :: . ....::  ..:.:::: :
ATAP21 LRMRVGSGDDTVGSG--SGRRK----VR-NGDGGGSVSSSRRRKCYAAELSTIDE
        100       110              120       130       140    

Library scan:  0:00:00  total CPU time:  0:00:00