SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.16 (Universal genetic code) : 689 aa
 vs  library
 searching hsmpp10 library

    672 residues in     1 sequences
The best scores are:                              s-w
HSMPP10, 672 bases, 551 checksum.                  (672) 938

>>HSMPP10, 672 bases, 551 checksum.                  (672 aa)
Smith-Waterman score: 938;   36.230% identity in 610 aa overlap

               10        20        30        40        50        60
K1F13. MLMKCEICSNVKLILGSQSMARKRILAEMGYDYTIVTADIDEKAIRTEKPEDLVVALAEA

               70        80        90       100       110       120
K1F13. KANEIISKLGGYSGSHGGVVGSVLVRNLKTGVKKGGWDKAEVYFHEIPEQVIDGLIDDAI

              130       140       150       160       170       180
K1F13. TYKVAGGLTLEHPLISPFIDSVFKQVSDKCGFLMSELRFGPIHNVKGPYIGPMTKGNPNF

              190       200             210       220              
K1F13. EGTEEAQSMATVKDSGFEALEK-L----KAT-EPPVFLAPSSISED-AR---SASQYL--
                          ::. :    ::: .:  ::   .:.:  :    : .. :  
HSMPP1                   TLERCLTEVGKATGRPECFL---TIQEGLASKFTSLTKVLYD
                                 10        20           30         

      230           240       250       260       270       280    
K1F13. FMKL----KPHNPKCPFDQLSSDGFDAEQIWQQIDMQSQPLLTSLRQEVKRFAKNPEEIR
       : :.    . :.   :...:  ..:: ::::::...:..:.:  ... :..   : :.: 
HSMPP1 FNKILENGRIHG--SPLQKLVIENFDDEQIWQQLELQNEPILQYFQNAVSETI-NDEDIS
      40        50          60        70        80        90       

          290       300       310        320           330         
K1F13. KLGKLALKVSHEDDIDEMDMDGFDSDDVDD-EDKEIES--NDS-E-GEDEEEEEE-----
        : . . .  .:.: .:.. :  :..:..: :..:. .  ::. : ::  :.  .     
HSMPP1 LLPE-SEEQEREEDGSEIEAD--DKEDLEDLEEEEVSDMGNDDPEMGERAENSSKSDLRK
        100        110         120       130       140       150   

               340        350                360       370         
K1F13. -----DEEEEEEEE-EEEEEEKDGDNEG---------IEDKFFKIKELEEFLE--EGEAE
            ::. . . .  . :...  .:.:         ..:::::..:.: .::  : : :
HSMPP1 SPVFSDEDSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKLSEMEAYLENIEKEEE
           160       170       180       190       200       210   

               380               390                 400           
K1F13. --------EYGIDH-------KNKKGV-AQRK-K-----QNLS--D--D--EDEED----
               :  ::        ... :. ...: :     .::.  :  :  :..::    
HSMPP1 RKDDNDEEEEDIDFFEDIDSDEDEGGLFGSKKLKSGKSSRNLKYKDFFDPVESDEDITNV
           220       230       240       250       260       270   

          410       420       430          440         450         
K1F13. DDDE-EEDVEFDAFAGGDDEETDKLGKARYD---DFFGGK--KETKMKLKD----LSEDE
        ::: . . : : .:   .::...:. .. :   :.  ..  :. : .::     : .: 
HSMPP1 HDDELDSNKEDDEIA---EEEAEELSISETDEDDDLQENEDNKQHKESLKRVTFALPDDA
           280          290       300       310       320       330

            460           470       480       490       500        
K1F13. EAE---IEN-KGN--E-KLSTHERARLKLQSKIEQMEKANLDPKHWTMQGEITAAKRPMN
       :.:   . : : :  : : :. :. . :.. :: ..::  :. : : .:::.:: ::: :
HSMPP1 ETEDTGVLNVKKNSDEVK-SSFEKRQEKMNEKIASLEKELLEKKPWQLQGEVTAQKRPEN
              340        350       360       370       380         

      510       520       530       540       550       560        
K1F13. SALEVDLDFEHNARPAPVITEEVTASLEDLIKSRIIEARFDDVQRAPRLPTKGKREAKE-
       : ::  : :.: .: :::::::.: .:::.::.:: .  .::: :  . : .   : :. 
HSMPP1 SLLEETLHFDHAVRMAPVITEETTLQLEDIIKQRIRDQAWDDVVRKEK-PKEDAYEYKKR
     390       400       410       420       430        440        

         570       580                            590       600    
K1F13. --LDESKSKKGLAEVYEASML-----------------FKK----LCLKLDALSHFHFTP
         ::. ::: .:::.::  ..                 ..:    : :::::::.::: :
HSMPP1 LTLDHEKSKLSLAEIYEQEYIKLNQQKTAEEENPEHVEIQKMMDSLFLKLDALSNFHFIP
      450       460       470       480       490       500        

          610        620       630       640         650       660 
K1F13. KPVIEEMSI-PNVSAIAMEEVAPVAVSDAAMLAPEEI-FSGK-GDIKDESELTQEDRKR-
       :: . :...  :. ::.:::::::.:::::.::::::  ..: ::::  .: :  :.:: 
HSMPP1 KPPVPEIKVVSNLPAITMEEVAPVSVSDAALLAPEEIKEKNKAGDIKTAAEKTATDKKRE
      510       520       530       540       550       560        

                 670       680                                     
K1F13. RRANK--KR-KFKAESANEPPKKALDTSTKNP                            
       :: .:  :: :.: :  .:  .: :. :.                               
HSMPP1 RRKKKYQKRMKIK-E--KEKRRKLLEKSSVDQAGKYSKTVASEKLKQLTKTGKASFIKDE
      570       580          590       600       610       620     

HSMPP1 GKDKALKSSQAFFSKLQDQVKMQINDAKKTEKKKKKRQDISVHKLKL
         630       640       650       660       670  

Library scan:  0:00:00  total CPU time:  0:00:00