SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.13 (Universal genetic code) : 255 aa
 vs  library
 searching y304_metja library

    159 residues in     1 sequences
The best scores are:                              s-w
Y304_METJA, 159 bases, 189 checksum.               (159) 435

>>Y304_METJA, 159 bases, 189 checksum.               (159 aa)
Smith-Waterman score: 435;   39.759% identity in 166 aa overlap

               10        20        30        40        50        60
K1F13. MGKAFYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKTPNVDKGAFVAP
                                                          ..:.. .: 
Y304_M                                                   MISKNVRIAK
                                                                 10

               70        80        90       100       110       120
K1F13. NASLSGDVHVGRGSSIWYGCVLRGDANSISVGAGTNIQDNALVHVAKTNLSGKVLPTVIG
       .: . ::: .:  ::.::. :.:::...: .:  .::::  .:: .:    :   ::.::
Y304_M GAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSK----G--YPTIIG
               20        30        40        50              60    

              130       140       150       160       170       180
K1F13. DNVTIGHSAVLHGCTVEDEAYIGTSATVLDGAHVEKHAMVASGALVRQNTRIPSGEVWGG
       : :.:::.::.::: .::.. .: .::.:.::.. .. .....::: :: .:: . .  :
Y304_M DYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLG
           70        80        90       100       110       120    

              190       200       210       220       230       240
K1F13. NPAKFLRKVTEEERVFFSSSAVEYSNLAQAHATENAKNLDEAEFKKLLNKKNARDTEYDS
        :.. .:..::::   .. .:..: .:..  . :. :                       
Y304_M VPGRVVRELTEEEIKSIKENALRYVKLSE--TLESYK                       
          130       140       150                                  

              250     
K1F13. VLDDLTLPENVPKAA

Library scan:  0:00:00  total CPU time:  0:00:00