SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1F13.11 (Universal genetic code) : 109 aa
 vs  library
 searching atap2237 library

    122 residues in     1 sequences
The best scores are:                              s-w
ATAP2237, 122 bases, 1EEE checksum.                (122) 302

>>ATAP2237, 122 bases, 1EEE checksum.                (122 aa)
Smith-Waterman score: 302;   42.969% identity in 128 aa overlap

                  10         20           30         40            
K1F13.   MIRALSTR-KVR-GSYKKLGDEEE---AGAGLLEVKPESVPT-NPH-----GQSPKVN
         :.:.:::: . : :.:....:.      :: :   .  :::   :      :  : . 
ATAP22 MQMLRSLSTRTRSRRGGYERVSDDSTFSLLGAKLR--RSTSVPYYAPSIKLGAGGVPTIL
               10        20        30          40        50        

          50              60        70        80        90         
K1F13. K--PVEKTR-----GS-AHPLFSFFEMSLKRKKKKKSTTTAKPEFARYLEYVKEGGVWDN
       .  : .:..     :. .::.::.:       :::::::: ::::.:::::.::::.:: 
ATAP22 EELPRQKSKKVKPTGKFSHPIFSLF-----YGKKKKSTTT-KPEFSRYLEYLKEGGMWDA
       60        70        80             90        100       110  

     100         
K1F13. TSNGPAIYYR
        .:.:.:::.
ATAP22 RANAPVIYYK
            120  

Library scan:  0:00:00  total CPU time:  0:00:00