Gene organization of K1F13 (83511 bp)
Chromosome V 24-26 Mb   FTP   Reference   Kazusa Status  
Gene organization of K1F13
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K1F13.1
-
2564..4449 9 0 cosmid K01C8
K1F13.2
-
4982..6245 4 4 peroxidase ATP6a, EST clone 157A5T7
K1F13.3
-
7430..8069 2 29 dehydrin rab18
K1F13.4
+
8825..10372 6 1 ATP binding protein gene
K1F13.5
-
10812..13902 9 1 hypothetical 30.2 kD protein Y4OV
K1F13.6
-
14329..15742 4 0 chromosome 4, ESSA I AP2 contig fragment No. 2
K1F13.7
+
23717..24864 4 1 hypothetical 27.6 kD protein in rpl26b-acb1 intergenic region
K1F13.8
-
24978..26858 3 1 chromosome 4, ESSA I contig fragment No. 2
K1F13.9
-
27830..29753 5 0 (1-4)-beta-mannan endohydrolase
K1F13.10
-
30905..32476 7 2 bex protein
K1F13.11
-
36342..36668 1 0 chromosome 4, ESSA I AP2 contig fragment No. 2
K1F13.12
-
36995..38590 1 0 chromosome II BAC T01B08 genomic sequence
K1F13.13
-
38935..40403 5 1 hypothetical protein MJ0304
K1F13.14
+
40846..42654 1 0 chromosome 4, ESSA I contig fragment No. 2
K1F13.15
-
42740..44491 9 0 possible apospory-associated protein c
K1F13.16
-
45572..49980 18 0 M phase phosphoprotein 10
K1F13.17
+
53284..55575 4 0 chromosome II BAC T06B20 genomic sequence
K1F13.18
+
57660..58989 3 20 oxygen-evolving enhancer protein 1 precursor
K1F13.19
+
61640..62107 1 1 chromosome 4, ESSA I AP2 contig fragment No. 1
K1F13.20
+
63171..63725 1 1 sts14 protein precursor
K1F13.21
-
64024..67231 10 0 chromosome II BAC F17A14 genomic sequence
K1F13.22
+
74139..76668 7 0 chromosome 4, ESSA I AP2 contig fragment No. 2
K1F13.23
+
77501..80919 11 0 chromosome 4, ESSA I AP2 contig fragment No. 2


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K1F13.P1
+
1..624 1 0 chromosome II BAC T30B22 genomic sequence
K1F13.P2
+
81636..83332 4 0 chromosome II BAC T5I7 genomic sequence


transcribed regions

identifier direction position Definition of the most similar sequence

K1F13.T1
+
6891..6974 AT-NHC cDNA clone B55TP


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K1F13.R1
-
44939..45012 1 0 tRNA-Ile(AAU)
K1F13.R2
+
57313..57386 1 0 tRNA-Asn(GUU)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VI. Sequence Features of the Regions of 1,367,185 bp Covered by 19 Physically assigned P1 and TAC Clones (1998) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Erika Asamizu, Takakazu Kaneko, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 213-216
o Kazusa Status