SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K1B16.P1 (Universal genetic code) : 75 aa
 vs  library
 searching atu39782 library

    446 residues in     1 sequences
The best scores are:                              s-w
ATU39782, 446 bases, E0F checksum.                 (446) 521

>>ATU39782, 446 bases, E0F checksum.                 (446 aa)
Smith-Waterman score: 521;   100.000% identity in 75 aa overlap

                                                               10  
K1B16.                                                 MVGAGVLGLPYA
                                                       ::::::::::::
ATU397 MVAQAPHDDHQDDEKLAAARQKEIEDWLPITSSRNAKWWYSAFHNVTAMVGAGVLGLPYA
               10        20        30        40        50        60

             20        30        40        50        60        70  
K1B16. MSQLGWGPGIAVLVLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU397 MSQLGWGPGIAVLVLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVV
               70        80        90       100       110       120

                                                                   
K1B16. PQQ                                                         
       :::                                                         
ATU397 PQQLIVEIGVCIVYMVTGGKSLKKFHELVCDDCKPIKLTYFIMIFASVHFVLSHLPNFNS
              130       140       150       160       170       180

ATU397 ISGSFSCCCRYVSQLLNNRMGIISKQRCSRRRSIRLQSENNSRYVFNFFSGLGDVAFAYA
              190       200       210       220       230       240

ATU397 GHNVVLEIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNILM
              250       260       270       280       290       300

ATU397 SLKKPAWLIATANIFVVIHVIGSYQIYAMPVFDMMETLLVKKLNFRPTTTLRFFVRNFYV
              310       320       330       340       350       360

ATU397 AATMFVGMTFPFFGGLLAFFGGFAFAPTTYFLPCVIWLAIYKPKKYSLSWWANWVCIVFG
              370       380       390       400       410       420

ATU397 LFLMVLSPIGGLRTIVIQAKGYKFYS
              430       440      

Library scan:  0:00:00  total CPU time:  0:00:00