SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19M22.P1 (Universal genetic code) : 461 aa
 vs  library
 searching gi:3047104 library

    492 residues in     1 sequences
The best scores are:                              s-w
gi|3047104                                         (492)2169

>>gi|3047104                                         (492 aa)
Smith-Waterman score: 2169;   69.017% identity in 468 aa overlap

                                                         10        
K19M22                                       NG--TD--DLPSFTEFSFDQLR
                                             ::  ..  :.:.: :....::.
gi|304 MSIPLRYCLDFMGGQCSSLSCCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLK
               10        20        30        40        50        60

       20        30        40        50        60        70        
K19M22 AATCGFSTDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQL
       ::: ::... :::::: :::::::::.::... ::::::.: ::::.:::::::..::::
gi|304 AATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQL
               70        80        90       100       110       120

       80        90       100       110       120       130        
K19M22 RNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEY
       :.::.:::.: ::::::::::::::: :::.::::::..:::::.:::::.:::::::::
gi|304 RSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEY
              130       140       150       160       170       180

      140       150               160       170       180       190
K19M22 CSSKGRALYHDLNAYRILFDQ--------DGNPRLSCFGLMKNSRDGKSYSTNLAFTPPE
       :.::::.:::::::::.:::.        . ::::: :::::::::::            
gi|304 CTSKGRTLYHDLNAYRVLFDEVFIRAFNKECNPRLSTFGLMKNSRDGK------------
              190       200       210       220                    

              200       210       220       230       240       250
K19M22 YLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDG
         :  :. ::::.:::::::::::::::::::::::::: .:.  : ::::::.::..::
gi|304 --R--RITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDG
          230       240       250       260       270       280    

              260       270       280       290        300         
K19M22 TDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPH-GAASPKETTSLT
       :.::::::::::::::::::.::::..:.::::::.. ::::::.:: :..::     :.
gi|304 TELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSP-----LS
          290       300       310       320       330              

     310       320       330       340       350       360         
K19M22 PLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKD
       :::.::::.::::. :::::.::::::::.:::::..::::.::.:::::.::.::. ::
gi|304 PLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKD
     340       350       360       370       380       390         

     370       380       390       400       410       420         
K19M22 FVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQ
       :  :.::::::: :: :.:::: ::: ::::::.::.::: ::.::::.:: : .: :::
gi|304 FREAIECYTQFI-DGGMISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQ
     400       410        420       430       440       450        

     430       440       450       460   
K19M22 AAALFSLGMDKDACETLKDGTSLEAKKHNNRN  
       .:.:  :::.:..  .::.:..::::        
gi|304 SASLGILGMEKESQIALKEGSNLEAKMNGVPRVK
      460       470       480       490  

Library scan:  0:00:00  total CPU time:  0:00:00