SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19M22.10 (Universal genetic code) : 288 aa
 vs  library
 searching gi:3335378 library

    291 residues in     1 sequences
The best scores are:                              s-w
gi|3335378                                         (291) 995

>>gi|3335378                                         (291 aa)
Smith-Waterman score: 995;   53.722% identity in 309 aa overlap

               10        20        30        40        50        60
K19M22 MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKV
          : :.: ..  .:::..:..        :. ::: ::: :::::: :: .:::::..:
gi|333    MSPAT-YLETSNWLFQENR--------GTKWTAEENKKFENALAFYDKDTPDRWSRV
                   10                20        30        40        

               70        80        90       100         110        
K19M22 AAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAG--GGGGCNGFK-
       ::..:::::.:::.:: .:: :::.:::::::.::: .:  :::::.:  :..: :::. 
gi|333 AAMLPGKTVGDVIKQYRELEEDVSDIEAGLIPIPGY-ASDSFTLDWGGYDGASGNNGFNM
       50        60        70        80         90       100       

       120          130       140       150       160       170    
K19M22 PGHQVC---NKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITR
        :.      .::..:.:. : :::::::::::::. ::::::::::::::::.:::: ::
gi|333 NGYYFSAAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTR
       110       120       130       140       150       160       

          180       190       200       210         220            
K19M22 TPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLEE--EASLETNKSSIV------VG
       ::::::::::::::::..:::::::.:::::::::. .  .:.   : .. .      ::
gi|333 TPTQVASHAQKYFIRQVNGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSPPSVG
       170       180       190       200       210       220       

         230        240       250            260          270      
K19M22 -DQRSRLTAFPWN-QTDNNGTQADAF-NITIGNAIS----GVHS--Y-GQVMIGGYNNAD
        .::   :.  :. ::  . : : :: :    ::.:    :. :  : ....  .. :: 
gi|333 GNQRE--TS-EWEGQTLYDETAA-AFYN---QNAFSETLLGMSSTPYMAKLQEQSFLNA-
       230          240        250          260       270          

        280        
K19M22 SCYDAQNTMFQL
       : ... :...:.
gi|333 SQFESYNAYLQM
     280       290 

Library scan:  0:00:00  total CPU time:  0:00:00