SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19E1.P1 (Universal genetic code) : 413 aa
 vs  library
 searching mtcy8d515 library

    469 residues in     1 sequences
The best scores are:                              s-w
MTCY8D515, 469 bases, AA2 checksum.                (469) 378

>>MTCY8D515, 469 bases, AA2 checksum.                (469 aa)
Smith-Waterman score: 378;   25.597% identity in 461 aa overlap

MTCY8D MKRLSGWDAVLLYSETPNVHMHTLKVAVIELDSDRQEFGVDAFREVIAGRLHKLEPLGYQ
               10        20        30        40        50        60

                  10        20         30          40        50    
K19E1.    EMNNGKKPRWVRTKVKVEEHVIVPDVDP-DIENPD--QYLEDYISKLTTIPMDLSKP
                 : : : . .:. .     . :  .. :   . :.. ...... :.. ..:
MTCY8D LVDVPLKFHHPMW-REHCQVDLNY---HIRPWRLRAPGGRRELDEAVGEIASTPLNRDHP
               70         80           90       100       110      

           60         70         80              90          100   
K19E1. LWEMHLL-GVKTSNAESYAIL-KIHHSLGDGMS---LMS--L-LLA---CTRKTSDPEAL
       ::::... :.  .: .  :.. ::::.:.::..   .:.  . ::      : . :: : 
MTCY8D LWEMYFVEGL--AN-HRIAVVAKIHHALADGVASANMMARGMDLLPGPEVGRYVPDP-A-
        120          130       140       150       160       170   

                   110         120       130       140       150   
K19E1. PT------VA-V-HKKRFG--PSCNSGFFNKIWWLFVGLWFILRLLFNTFVDILMFALTI
       ::      .: . : ...:  :.        : .   ::  . :   ..    :  :::.
MTCY8D PTKRQLLSAAFIDHLRHLGRIPAT-------IRYTTQGLGRVRR---SS--RKLSPALTM
             180       190              200          210           

            160       170        180       190       200       210 
K19E1. -FVLRDTETPLLAKPGSELIP-KRFVHRIISFDDVKLVKNAMKMTVNDVLLGVTQAGLSR
        :    :  : . .   .: : .::.   ... ::: . . .  :.::..:... ..: :
MTCY8D PF----TPPPTFMN--HRLTPERRFATATLALIDVKATAKLLGATINDMVLAMSTGAL-R
     220             230       240       250       260       270   

             220       230        240       250       260          
K19E1. YLSRKYDQEATPKSKESMRRIRLRSA-IMINLRPNAGIEALADMMAKKSKCRWGNLF-GY
        :  .:: .: :     .    : :. .  .. :    : ..           :: : :.
MTCY8D TLLLRYDGKAEP-----L----LASVPVSYDFSP----ERIS-----------GNRFTGM
            280                290           300                   

     270        280         290       300                 310      
K19E1. IL-LPFSVGLETDPLEYVR--QAKATIDRKKHSL---EAVFS--MAFF-----KLILKVL
       .. :: .     :::. ::  . .:.  ...:.:   : . :   :..     . ... :
MTCY8D LVALPAD---SDDPLQRVRVCHENAVSAKESHQLLGPELI-SRWAAYWPPAGAEALFRWL
      310          320       330       340        350       360    

        320       330       340       350           360            
K19E1. GLKASVVLVRKVIHSTTLSFSNVVGPKEEITFHGHPLN---Y-ISPCVFGHPH-----TY
       . . .     ::..   :..::: ::.:.    :  :    : ..: . :        .:
MTCY8D SERDGQ---NKVLN---LNISNVPGPRERGRV-GAALVTEIYSVGPLTAGSGLNITVWSY
          370             380       390        400       410       

       370       380           390       400        410           
K19E1. ANKVIISVTADPTVIPDPHK----MCDDLVESLKMIKAAVLERGL-YEIEV        
       .... ::: .: ... :::.    :  :..: ..  .::    ::  :. :        
MTCY8D VDQLNISVLTDGSTVQDPHEVTAGMIADFIE-IR--RAA----GLSVELTVVESAMAQA
       420       430       440        450             460         

Library scan:  0:00:00  total CPU time:  0:00:01