SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19E1.14 (Universal genetic code) : 407 aa
 vs  library
 searching mtcy8d515 library

    469 residues in     1 sequences
The best scores are:                              s-w
MTCY8D515, 469 bases, AA2 checksum.                (469) 301

>>MTCY8D515, 469 bases, AA2 checksum.                (469 aa)
Smith-Waterman score: 301;   24.500% identity in 400 aa overlap

                                10        20          30           
K19E1.                  MTKEEVEEEPLSPMARLFQSPGIENC--IITMIGFKAKINP--
                                          :  :..    .:.  :   :..:  
MTCY8D MKRLSGWDAVLLYSETPNVHMHTLKVAVIELDSDRQEFGVDAFREVIA--GRLHKLEPLG
               10        20        30        40          50        

       40          50        60         70        80        90     
K19E1. -DIILD-DLK-HNVSKHPRFCSKLSDDGERWMK-TKVNVEDHVFVPDIDLQEINKDGDGF
        ... :  :: :    ::     .      : .  .:... :.  :     ..   : : 
MTCY8D YQLV-DVPLKFH----HP-----M------WREHCQVDLNYHIR-P----WRLRAPG-GR
       60             70                   80             90       

           100       110       120       130       140       150   
K19E1. --VDDYVSRLTLSPLDKSKPLWDIHILNVKTSDAEAVGVMRCHHSLADGMSLMSLLVACT
         .:. :.... .::....:::......  ..   :: : . ::.::::..  ... :  
MTCY8D RELDEAVGEIASTPLNRDHPLWEMYFVEGLANHRIAV-VAKIHHALADGVASANMM-A--
        100       110       120       130        140       150     

           160             170       180        190        200     
K19E1. RKTSNLESFPTI------PAIKRREQMMSHRFGNKGWY-SRSINA-VYYAVRLIWNTI--
       :  . : . : .      ::  .: :..:  : ..  . .: : : . :... . . .  
MTCY8D RGMDLLPG-PEVGRYVPDPAPTKR-QLLSAAFIDHLRHLGR-IPATIRYTTQGL-GRVRR
            160        170        180       190        200         

           210       220       230       240       250       260   
K19E1. VDLLLLWATSLFFKDTETPISEGIGSGNNARRFYHRTVSLDDIKLIKNAMKMTINDVLLG
        .  :  : .. :    : ... .   .  :::   :..: :.:   . .  ::::..:.
MTCY8D SSRKLSPALTMPFTPPPTFMNHRL---TPERRFATATLALIDVKATAKLLGATINDMVLA
      210       220       230          240       250       260     

           270       280       290            300       310        
K19E1. VTQDALSRYLNQRYGDKNGEGVTTTSNLN-NL-PGKI---RIRAGVAVNLRQDIG--IQ-
       ..  :: : :  :: : ..: . ..  .. .. : .:   :. .:. : :  :    .: 
MTCY8D MSTGAL-RTLLLRY-DGKAEPLLASVPVSYDFSPERISGNRF-TGMLVALPADSDDPLQR
         270         280       290       300        310       320  

         320         330        340       350       360            
K19E1. VFNRTCS-NTTTIL-SN-IVGPVEEVSLHGNCITYIALTGYGHSQALMIHFISY---ANK
       :  :.:  :...   :. ..:: : .:  .   .:   .:   ..::. ...:     ::
MTCY8D V--RVCHENAVSAKESHQLLGP-ELISRWA---AYWPPAG---AEALF-RWLSERDGQNK
              330       340           350          360        370  

     370       380       390       400                             
K19E1. MIITIAVDPAVIPDPHNICDEMEKSLKAMKDTLSGKSD                      
        .... ..   .: :.                                            
MTCY8D -VLNLNISN--VPGPRERGRVGAALVTEIYSVGPLTAGSGLNITVWSYVDQLNISVLTDG
             380         390       400       410       420         

MTCY8D STVQDPHEVTAGMIADFIEIRRAAGLSVELTVVESAMAQA
     430       440       450       460         

Library scan:  0:00:00  total CPU time:  0:00:01