SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19E1.12 (Universal genetic code) : 263 aa
 vs  library
 searching atu9043912 library

    305 residues in     1 sequences
The best scores are:                              s-w
ATU9043912, 305 bases, 1596 checksum.              (305)1182

>>ATU9043912, 305 bases, 1596 checksum.              (305 aa)
Smith-Waterman score: 1182;   60.738% identity in 298 aa overlap

                          10         20          30         40     
K19E1.            METDSIDSVIDDDEIHQ-KHQFSS--TKSQGGATV-VISPATSVYELLE
                  .:..:  .:  : :... : . .:  ::: :....  .  ...::::::
ATU904 MAPGGSALKEALESNST-GV--DYEVKMAKVEANSKPTKS-GSGSIGKFHSSNGVYELLE
               10           20        30         40        50      

          50        60        70                                   
K19E1. CPVCTNSMYPPIHQCHNGHTLCSTCK---------------------------S------
       :::::: :::::::: :::::::.::                           :      
ATU904 CPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCR
         60        70        80        90       100       110      

                          80        90       100       110         
K19E1. -------------SKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTG
                    ::::::..: :: ::::::::::...:::  :: ::.:::::::: :
ATU904 YQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDG
        120       130       140       150       160       170      

     120       130       140       150       160       170         
K19E1. CTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDA
       ::::::::::::.::::::::::::.:::. ::::::::::::::::::::::::::..:
ATU904 CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEA
        180       190       200       210       220       230      

     180       190       200       210       220       230         
K19E1. RNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLR
       ....::::::. .:: ::.: :::.::::::::::.::::: ::.::.:::.::.:::::
ATU904 KKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLR
        240       250       260       270       280       290      

     240       250       260   
K19E1. VTGRIWKEQQNPDSGVCITSMCSS
       ::::::::.               
ATU904 VTGRIWKEE               
        300                    

Library scan:  0:00:00  total CPU time:  0:00:00