SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19E1.11 (Universal genetic code) : 550 aa
 vs  library
 searching af036328 library

    579 residues in     1 sequences
The best scores are:                              s-w
AF036328, 579 bases, 8A2 checksum.                 (579)3248

>>AF036328, 579 bases, 8A2 checksum.                 (579 aa)
Smith-Waterman score: 3248;   89.267% identity in 587 aa overlap

               10        20        30        40        50        60
K19E1. MAAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0363 MAAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGT
               10        20        30        40        50        60

               70        80        90       100       110       120
K19E1. SFLDNRGGGERRNSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRVNGSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0363 SFLDNRGGGERRNSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRVNGSSV
               70        80        90       100       110       120

              130       140       150       160            170     
K19E1. NLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICT----FS-GS-----
       :::::::::::.:::::::::::::::::::::::::::::::::     :  :.     
AF0363 NLGRGGGGGGSNPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKK
              130       140       150       160       170       180

                180           190       200       210       220    
K19E1. -LQ-SLQEDISRIITETS----AGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLA
        :. .. .  .::  :.:    ::::::::::::::::::::::::::::::::::::::
AF0363 VLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLA
              190       200       210       220       230       240

          230       240       250       260       270       280    
K19E1. KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0363 KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI
              250       260       270       280       290       300

          290       300       310       320       330       340    
K19E1. TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQVCRASLYSIDTK
       ::::::: ::::::::::::::::::::::::::::::::::::::::        ::::
AF0363 TKKAESLYISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ--------IDTK
              310       320       330       340               350  

          350       360       370       380       390       400    
K19E1. DILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLI
       ::::::::::::::::::::::::::::::::::::::::::.::::::::::::.::::
AF0363 DILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTTAAVASNLMETVETSDLI
            360       370       380       390       400       410  

          410       420       430                            440   
K19E1. AYGLIPEFVGRFPVLVSLSALTENQLMQV---------------------KLHFTESALR
       :::::::::::::::::::::::::::::                     ::::::::::
AF0363 AYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALR
            420       430       440       450       460       470  

           450       460       470       480       490       500   
K19E1. LIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0363 LIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSG
            480       490       500       510       520       530  

           510       520       530       540       550
K19E1. AKILRGKGALARYLSETNSKDSPQTTKEGSDGETEVEAEIPSVVASM
       :::::::::::::::::::::::::::::::::::::::::::::::
AF0363 AKILRGKGALARYLSETNSKDSPQTTKEGSDGETEVEAEIPSVVASM
            540       550       560       570         

Library scan:  0:00:00  total CPU time:  0:00:02