SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19E1.10 (Universal genetic code) : 362 aa
 vs  library
 searching atf10n77 library

    283 residues in     1 sequences
The best scores are:                              s-w
ATF10N77, 283 bases, 9C3 checksum.                 (283) 637

>>ATF10N77, 283 bases, 9C3 checksum.                 (283 aa)
Smith-Waterman score: 637;   46.903% identity in 226 aa overlap

               10        20        30        40        50        60
K19E1. MARKGSSIRLSSSRISTLLLFMFATFASFYVAGRLWQESQTRVHLINELDRVTGQGKSAI

               70        80        90       100       110       120
K19E1. SVDDTLKIIACREQKKTLAALEMELSSARQEGFVSKSPKLADGTETKKRPLVVIGIMTSL

              130       140       150       160       170       180
K19E1. GNKKKRDAVRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFI
                         .::::: :.::. :::::::::.:::.:..:: ::  : ::.
ATF10N                  DALKKLE-ERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFL
                                 10        20        30        40  

              190       200       210       220       230          
K19E1. ILDDVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPR--
       ::..  :: ::  ::::.:.. :.. :::.::.:. ::  :..:  :  . : ::. :  
ATF10N ILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDN--VDLDLEG--MIALLESRRSQ
             50        60        70        80            90        

        240       250       260       270       280       290      
K19E1. --AYIGCMKSGEVFSEPNHKWYEPEWWKFGDKKAYFRHAYGEMYVITHALARFVSINRDI
         :::::::::.:..: . .::::::::::: :.::::: : . .... ::..:.:::  
ATF10N DGAYIGCMKSGDVITEEGSQWYEPEWWKFGDDKSYFRHATGSLVILSKNLAQYVNINR--
      100       110       120       130       140       150        

        300        310         320       330                    340
K19E1. LHSYAHDDV-STGSWFV--GLDVKHVDEGKFCCSASHM--RRS----VVE--PK-----T
       : ...   . .  : .:  .: :. :..:   :: . .  ..:    .:.  :.     :
ATF10N L-GFT---IWQKMSIYVKQSL-VSFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVT
         160          170        180       190       200       210 

              350       360                                        
K19E1. NPKCEALGSLVLIEKEEQMTFV                                      
       :: :.                                                       
ATF10N NP-CNNCKFQNTELLCVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTS
              220       230       240       250       260       270

ATF10N FDLKVIDGVMVCY
              280   

Library scan:  0:00:00  total CPU time:  0:00:00