SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K19B1.P1 (Universal genetic code) : 357 aa
 vs  library
 searching xcpe_xenla library

   1203 residues in     1 sequences
The best scores are:                              s-w
XCPE_XENLA, 1203 bases, 2054 checksum.             (1203)1198

>>XCPE_XENLA, 1203 bases, 2054 checksum.             (1203 aa)
Smith-Waterman score: 1198;   53.039% identity in 362 aa overlap

XCPE_X MHVKSIIIDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRAS
               10        20        30        40        50        60

XCPE_X NLQDLVYKNGQAGITKATVSITFDNYDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV
               70        80        90       100       110       120

XCPE_X NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYECKKIA
              130       140       150       160       170       180

XCPE_X AQKTIEKKEAKLKEIQTILEEEITPTIHKLKEERSSYLEYQKIMREIEHLSRLYVAYQFV
              190       200       210       220       230       240

XCPE_X CAEETKVRSAEELKEMQDSILKLQDTMAENERKVKELGKEIAELEKMRDQEVGGALRSLE
              250       260       270       280       290       300

XCPE_X EALSEAQRADTKVQSALDLKKQNMKAEREKKRKELVKSMEEDAKVLTAKEKEVKKITDGL
              310       320       330       340       350       360

XCPE_X SSLQEASQKDVEAFTSAQQHFNAVSAGLSSNEDGEEATLAGQMMACKNETSKAETEAKQA
              370       380       390       400       410       420

XCPE_X QMKLKHAQQELKTKQAEVKKMDGGYKKDNEAFEAVKKSKEKLEVEMKKLNYEDGREEQLL
              430       440       450       460       470       480

XCPE_X EKRRGLSRDVNRLREAYESLMARFPNLQFEYKDPEKNWDSDRVKGLVASLISIKDVSTAT
              490       500       510       520       530       540

XCPE_X ALEVVAGGRLYNVVVDTEVTGKKLLEKGELKRRFTIIPLNKISARCLGKDTVNVAKNLVG
              550       560       570       580       590       600

XCPE_X ADNVNLALSLVGYESELQKAMEYVFGTTLVCDTMDNAKKVTFDKRIMTKTVTLGGDTFDP
              610       620       630       640       650       660

XCPE_X QGTLSGGARSQNASVLVRLQELKDVQDELKAKETELQEVEKELMTLKNTVERYRQLKQQW
              670       680       690       700       710       720

XCPE_X EMKSEEAELLQTKLQQSSYHKQQEELDSLKQTIEESEETLKNTKEVQKKAEEKFKVLEHK
              730       740       750       760       770       780

                                                        10         
K19B1.                                          KLVMEEEAMKQEQSSLESH
                                                 ::.: : .:.::.. ...
XCPE_X MKNAEAERERELKEAQQKLDTAKKKADASNKKMKEKQQEVDALVLELEELKREQTTYKQQ
              790       800       810       820       830       840

      20               30        40        50         60        70 
K19B1. LTSL-ET------QISTLTSEVDEQRAKVDALQKIHDESLAELK-LIHAKMKECDTQISG
       . .. :.      : ....:::  .. : .:..: .:: ::. : .: .. ::  :. : 
XCPE_X IETVDEAMKAYQEQADSMASEV--SKNK-EAVKKAQDE-LAKQKEIIMGHDKEIKTK-S-
              850       860          870        880       890      

              80        90       100       110       120       130 
K19B1. FVTDQEKCLQKLSDMKLERKKLENEVVRMETDHKDCSVKVDKLVEKHTWIASEKQLFGKG
         ..  :  .. .:..:. :.::... . . :  : ..:: :... . ::::::.:::..
XCPE_X --SEAGKLRENNNDLQLKIKELEHNISKHKKDSADAAAKVAKMLNDYEWIASEKHLFGQA
            900       910       920       930       940       950  

             140       150       160       170       180       190 
K19B1. GTDYDFESCDPYVAREKLEKLQSDQSGLEKRVNKKVMAMFEKAEDEYNALISKKNTIEND
       .: :::.. .:  : ..:.:::  .  : . :: ..: :. .::..:: :...:  .:::
XCPE_X NTAYDFKTNNPKEAGQRLHKLQEKKEKLGRNVNMRAMNMLTQAEERYNDLMKRKRIVEND
            960       970       980       990      1000      1010  

             200       210       220       230       240       250 
K19B1. KSKITKVIEELDEKKKETLKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEDGNFLDGLEVR
       ::::  .:::::.::.:.:...: :::.::::::::::::. : : :::  . ::::: .
XCPE_X KSKILTTIEELDQKKNEALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQSVLDGLEFK
           1020      1030      1040      1050      1060      1070  

             260       270       280       290       300       310 
K19B1. VAFGKVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI
       ::.:..::..:.:::::::::.:::::::.:::::::.:::::::::::::::::::.:.
XCPE_X VALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQML
           1080      1090      1100      1110      1120      1130  

             320       330       340       350                     
K19B1. RAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQTK              
       :.:: ::::::::::.::::::::::.:::::::::: : . .:.               
XCPE_X RTHFRHSQFIVVSLKDGMFNNANVLFKTKFVDGVSTVARFAQNQNGGSSAGQQRSDKSKT
           1140      1150      1160      1170      1180      1190  

XCPE_X KERRNRMEVDK
           1200   

Library scan:  0:00:00  total CPU time:  0:00:00