SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K18L3.P2 (Universal genetic code) : 62 aa
 vs  library
 searching s57612 library

    342 residues in     1 sequences
The best scores are:                              s-w
S57612, 342 bases, 205F checksum.                  (342) 327

>>S57612, 342 bases, 205F checksum.                  (342 aa)
Smith-Waterman score: 327;   72.581% identity in 62 aa overlap

S57612 MTTNKQVIFKDHVSFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPD
               10        20        30        40        50        60

                            10        20        30        40       
K18L3.              PISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIH
                    :: :.::...:.: ::.:: :::::: :::::::::::    ::::.
S57612 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ
               70        80        90       100       110       120

        50        60                                               
K18L3. HTDVPLSFYTGLLGI                                             
       :::::::.::::::.                                             
S57612 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYV
              130       140       150       160       170       180

S57612 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLL
              190       200       210       220       230       240

S57612 NMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPR
              250       260       270       280       290       300

S57612 IKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE
              310       320       330       340  

Library scan:  0:00:00  total CPU time:  0:00:00