SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K18L3.10 (Universal genetic code) : 353 aa
 vs  library
 searching s57611 library

    345 residues in     1 sequences
The best scores are:                              s-w
S57611, 345 bases, 156 checksum.                   (345)1820

>>S57611, 345 bases, 156 checksum.                   (345 aa)
Smith-Waterman score: 1820;   75.652% identity in 345 aa overlap

               10        20        30        40        50        60
K18L3. MANISVVTTATNNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSMAVLVKNLYLSCDPF
               ::::.::::..:::::: :::. ...:::.:::: :. .::::::::::::.
S57611        MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPY
                      10        20        30        40        50   

               70        80        90       100       110       120
K18L3. SRIRMEKPDPSSPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVI
        :::: :::::. :..:.::. :.::.:.::.. :.: ::.:: :::::: :.:::::::
S57611 MRIRMGKPDPST-AALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVI
            60         70        80        90       100       110  

              130       140       150       160       170       180
K18L3. TPTPSSHFKIHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLV
       ::   .::::.:::::::.::::::.::.:::.::::.::::.::::.::::::::::::
S57611 TPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLV
            120       130       140       150       160       170  

              190       200       210       220       230       240
K18L3. GQFAKMAGCYVVGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFEN
       ::.::: ::::::::.:::::::::::::.:.::::::: ::.::::::::.::::::::
S57611 GQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN
            180       190       200       210       220       230  

              250       260       270       280       290       300
K18L3. VGGKMLDAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDK
       :::::::::: ::  :::::.:::::::::.. ::::::..:.:::::.:::.. .:.::
S57611 VGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDK
            240       250       260       270       280       290  

              310       320       330       340       350   
K18L3. YSKFLDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE
       :::::.:.::..::::::::::.:.:::..: ::.:::::::::::.:.::::
S57611 YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE
            300       310       320       330       340     

Library scan:  0:00:00  total CPU time:  0:00:00