SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K18I23.15 (Universal genetic code) : 558 aa
 vs  library
 searching spb4_yeast library

    606 residues in     1 sequences
The best scores are:                              s-w
SPB4_YEAST, 606 bases, 1B29 checksum.              (606)1125

>>SPB4_YEAST, 606 bases, 1B29 checksum.              (606 aa)
Smith-Waterman score: 1125;   36.250% identity in 640 aa overlap

               10          20          30        40        50      
K18I23 MDSSANINKALT--ETRFSDLEPPL-SG-DIIEALNQSDFEFCTPVQAATIPLLCSYKDV
             ..:.:   .  :: : : . .: :..       ::  :::::.:::.: . :::
SPB4_Y       MSKSLEWDNLGFS-LLPWIRTGLDVM------GFETMTPVQASTIPMLAGNKDV
                     10         20              30        40       

         60        70         80           90       100       110  
K18I23 AVDAATGSGKTLAFVVPLVE-ILRR--STS-FPPKPHQVMGVIISPTRELSTQIYNVAQP
       .::..:::::: :::.:..: ....  .:: :  : :   ..::.:::::: :: .:.  
SPB4_Y VVDSVTGSGKTAAFVIPVLEKVVKEEANTSKFK-KAH-FHSLIIAPTRELSRQIESVVLS
        50        60        70        80          90       100     

                120       130          140       150               
K18I23 FV----STLANVNSVLLVGGRE--VKADMK-IIEEEGCNVLIGTPGRLSD----------
       :.    : :  ..  ::::  :  :. :.. .....  ..:::::::. :          
SPB4_Y FLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRP-QILIGTPGRVLDFLQMPAVKTS
         110       120       130       140        150       160    

              160                    170        180       190      
K18I23 -----IMERME-ILD--F-RNLE---------RRTGLFSAT-QTEGVEELAKAGLRNPVR
            .:.. . .::  : .. :         ::::::::: .. :  .. :.:::::::
SPB4_Y ACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSATMRSAG-SDIFKTGLRNPVR
          170       180       190       200       210        220   

        200       210       220       230         240        250   
K18I23 VEVRAKSKSESSQQLTNSKTPSGLHLEYMECEAD--KKSSQLVDLLIKNSD-KKLIVFFM
       . :  .::        : ..::.:.:.:  : ..  .: . ::..: .:   :: ::.: 
SPB4_Y ITV--NSK--------N-QAPSSLKLNY--CVVNPAEKLQLLVSIL-NNYKFKKCIVYFP
                     230        240         250        260         

           260          270        280       290        300        
K18I23 TCASVDY-WGLV--LSKIPAL-KSISLIPIHGDMKQNARDKALASFTKA-SSGALLCTDV
       ::.::.: ....  :.:   : . . .. .:: .. .:: :.:..:: . :...:. :::
SPB4_Y TCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTDSLSNSVLFTTDV
     270       280       290       300       310       320         

      310       320       330       340       350              360 
K18I23 AARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAI-------EEAYVEFMRIR
       ::::.::: .: :.: ::: . .:: :: :::.: .: :.::       :: .. ::...
SPB4_Y AARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGKAITFLNEGREEDFIPFMQVK
     330       340       350       360       370       380         

               370       380       390       400       410         
K18I23 RVPLEER--KCSEDASDVIPIIRSAAMKDRAVMEKGLKAFVSFVRAYKEHHCSFIFRWKD
        : :::   . .  ...    .:.  ..::  ..::.::.:.:.. :..:  . ::: ..
SPB4_Y NVELEELDLEVKGITTNFYEDFRNWILEDRDRFDKGVKAYVAFIKYYSNHSATSIFRLQS
     390       400       410       420       430       440         

     420        430       440          450            460       470
K18I23 LE-IGKLAMGYGLLYLPSMSEVKQHRLSSE---GFTP----VEG-VKFEEIKFKDKYREK
       :. .: .:  :::. :: : :. .. :..:   :. :    :.  :...: :.::: :::
SPB4_Y LDYVG-IAKLYGLFRLPRMPEITKY-LATEKQEGIFPGNWLVDPPVNMDEYKYKDKKREK
     450        460       470        480       490       500       

                 480       490          500       510         520  
K18I23 QRQQNLQ-VR--KEKRQEEKKEKGKRKRV---DASASNDPKKASRK--LTGKQRQTIQT-
       .::..:. .   ..:..  :.:  :.: .   : . ... .:  ::  .. : :..:.  
SPB4_Y ERQETLKNISLINDKKKL-KSEL-KKKNLAWSDKTLTKE-RKLERKEKMSLK-RKAIEEE
       510       520         530       540        550        560   

                     530        540       550         
K18I23 --AE--DE----EVMDRDYK-LMIKVKKGLIKEDEYERLTGD-DDLF
         ::  ::    : . .:.: .... :.   :.   . . :. ::: 
SPB4_Y LKAEELDENAEEERIKEDWKEIVLQNKR---KKVSSKAIQGNFDDL 
           570       580       590          600       

Library scan:  0:00:00  total CPU time:  0:00:02