SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K18I23.14 (Universal genetic code) : 241 aa
 vs  library
 searching fkb1_drome library

    357 residues in     1 sequences
The best scores are:                              s-w
FKB1_DROME, 357 bases, 97C checksum.               (357) 214

>>FKB1_DROME, 357 bases, 97C checksum.               (357 aa)
Smith-Waterman score: 214;   28.517% identity in 263 aa overlap

FKB1_D MSMFWGLNMKPERKYSQTIIKSFHISGVALDKGQEAKLYLAAEKQEYIVATVTKAIPQVA
               10        20        30        40        50        60

                  10        20        30        40           50    
K18I23   MNL-RADKPTEINVGQLVSEHFSSCGEIWEIYIPLKFDETN---TILNRFWWLLPPPF
         .:. ..:.    ..:. .:   :  : . .:    . :: .   :: :    ::    
FKB1_D LDLNFSKGDRIMFYTAGD-AS--VSLLGYLHDI--DSEDDEDDDQMTIEN----LLNSKA
               70         80          90         100           110 

           60        70        80              90         100      
K18I23 LSNSSAQVNVGGWNVSVEAYPYPAHANDS--VR---AVV-HGK--DVADTVTQLNGSYMR
       ..::. . .    : : :     .  .::  ..   . . .:.  :  : : . :     
FKB1_D IKNSKKSEDDEDENESGEEDEEDTD-DDSQIIEEYESFLENGEEED-DDDVDEDN--EES
             120       130        140       150        160         

        110        120        130          140        150       160
K18I23 GRKLAVLGDCQ-TGNTYTPH-SPPHPSA-MD--AAIPKS-RSESSMSPSESAKKNEKISE
       :..     : : . .. . . .: .  : ..  :.  :: . ..... .: ::...: .:
FKB1_D GEE-----DEQDSDDSEAEEEQPKRKVAKLSPGASAKKSGKEQNGVAKKEEAKQQQKKKE
       170            180       190       200       210       220  

                 170              180        190       200         
K18I23 --EATVES-KAFSISVEKQTP---D----LDGL-IVEELCMGNPNGKKAEPGKRVSVHYT
         ::  :. ::   .  :: :   :      :. ::... .:  .:..:. ::::::.: 
FKB1_D KPEAKKEQPKAKEPA--KQQPASKDPRTITGGVKIVDQV-VG--KGEEAKQGKRVSVYYI
            230         240       250        260         270       

     210       220        230       240                            
K18I23 GKLQGNGKIFDSTV-GKSRYKFRLGWYYNLMRK                           
       :.::.:.: ::: . ::  .:: ::                                   
FKB1_D GRLQSNNKTFDSLLKGKP-FKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARG
       280       290        300       310       320       330      

FKB1_D APPKIGPNSTLVFEVELKAVH
        340       350       

Library scan:  0:00:00  total CPU time:  0:00:00