SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K18G13.P1 (Universal genetic code) : 395 aa
 vs  library
 searching ilr1_arath library

    442 residues in     1 sequences
The best scores are:                              s-w
ILR1_ARATH, 442 bases, 216C checksum.              (442)1309

>>ILR1_ARATH, 442 bases, 216C checksum.              (442 aa)
Smith-Waterman score: 1309;   49.370% identity in 397 aa overlap

                                                           10      
K18G13                                             ALGDKEWLVSVRRQIH
                                                        ::. ..::.::
ILR1_A MDFSGRFFVIFVTFFFLPPLSSAGSYDSGSGLESLARGMLHSAKDPEFFEWMRGIRRKIH
               10        20        30        40        50        60

         20        30        40        50        60        70      
K18G13 ENPELLFELHKTSALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQ
       ::::  :.  ::: :.: ::: :::.:.:::::::.:: :::   :: .:::::::::::
ILR1_A ENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQ
               70        80        90       100       110       120

         80        90       100       110       120       130      
K18G13 ELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAF
       :::::. :::.::::::::::....:::::::::.  :....:::.:.:::.::: :::.
ILR1_A ELVEWESKSKVDGKMHACGHDTYVAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAY
              130       140       150       160       170       180

        140       150       160       170       180        190     
K18G13 HMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGK-SPASSETYSC
       .:.:.  : : ..:...::  ..:.: ...  : .::....:.: . :. : :..  .: 
ILR1_A EMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSK
              190       200       210       220       230       240

         200       210       220       230       240       250     
K18G13 VDPVLAASSTILALQLIISREVDPLLSHVLSVTFMKSGGSEFDVIPAYVEFGGTLRSLTT
        ::::::::...::: :.:::.::: . :..: ... ::   .:::  ..::::.:::..
ILR1_A -DPVLAASSAVVALQQIVSRELDPLEAGVVTVGYIE-GGHAQNVIPQSAKFGGTFRSLSN
               250       260       270        280       290        

         260       270       280       290        300       310    
K18G13 NGINWLIKRLKEVVEGQAEVQRCKADIDMHEDDHP-MYPATVNDHKLHEFTEKVLKLLLG
       .:. .. .:.::. :.:: : ::::.... :. .: ..:.  ::. :.:  .:: . ..:
ILR1_A DGLLFIQRRIKEISEAQASVYRCKAEVNF-EEKKPSLHPVMNNDEGLYEHGKKVAEAMIG
      300       310       320        330       340       350       

            320       330        340       350       360       370 
K18G13 PEKVK--PANKVMAGEDFAFYQQKIPG-YYIGIGIRNEEIGSVRSVHSPYFFLDENVLPI
        .. .  :.  .:.::::.:. ::  .  .. .::.:: .:. . .::::::.::..::.
ILR1_A KNNFHDFPV--TMGGEDFSFFTQKTKAAIFV-LGIKNETLGAGKPLHSPYFFVDEEALPV
       360         370       380        390       400       410    

             380           390     
K18G13 GSATFAALAEMYLQEH----QNQTKSGD
       :.:  ::.:  ::.::    ....::  
ILR1_A GAALHAAMAVSYLDEHGHSHEEEVKSEL
          420       430       440  

Library scan:  0:00:00  total CPU time:  0:00:01