SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K16L22.P1 (Universal genetic code) : 65 aa
 vs  library
 searching af0589141 library

    928 residues in     1 sequences
The best scores are:                              s-w
AF0589141, 928 bases, 1954 checksum.               (928) 275

>>AF0589141, 928 bases, 1954 checksum.               (928 aa)
Smith-Waterman score: 275;   75.510% identity in 49 aa overlap

AF0589 MEERKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAV
               10        20        30        40        50        60

AF0589 NHCSITDLAYHGPLFTWSNKRENDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLR
               70        80        90       100       110       120

AF0589 CRINLNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLK
              130       140       150       160       170       180

AF0589 GLKPLLRNLGKERLGNLVKQTKEAFETLCQKQAMKMANPSPSSMQEENEAYAKWDHIAVL
              190       200       210       220       230       240

AF0589 EEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEH
              250       260       270       280       290       300

AF0589 HFREFLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPG
              310       320       330       340       350       360

AF0589 PDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPI
              370       380       390       400       410       420

AF0589 SCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSS
              430       440       450       460       470       480

AF0589 RCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSS
              490       500       510       520       530       540

AF0589 ARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSD
              550       560       570       580       590       600

AF0589 GKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYL
              610       620       630       640       650       660

AF0589 GLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRLP
              670       680       690       700       710       720

AF0589 RACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKEAWHKGVWFAHETPKHSFCVWL
              730       740       750       760       770       780

AF0589 AIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYTSGIWEALAKNLLQRSYT
              790       800       810       820       830       840

                                                   10        20    
K16L22                                     ERNGRRHGEDPNPAARLIRWIDKQ
                                           ::::::::: ::::::::.::::.
AF0589 TDWQTIISYVSGQCHDRVSCFLARSVLQASVYTIWRERNGRRHGETPNPAARLIQWIDKH
              850       860       870       880       890       900

           30        40        50        60     
K16L22 MRNALSSIKEMGDRRYDTGLQLWFATANPLLIFNFLSCFQS
       .:: :: :.. ::.::: :::.:::                
AF0589 IRNMLSVIHQKGDKRYDKGLQMWFAYRS             
              910       920                     

Library scan:  0:00:00  total CPU time:  0:00:00