SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K16L22.11 (Universal genetic code) : 288 aa
 vs  library
 searching atfca530 library

    340 residues in     1 sequences
The best scores are:                              s-w
ATFCA530, 340 bases, 1A0E checksum.                (340) 819

>>ATFCA530, 340 bases, 1A0E checksum.                (340 aa)
Smith-Waterman score: 819;   43.020% identity in 351 aa overlap

                     10        20         30        40        50   
K16L22       MCTQDETIFVLHDQQSNNSAAQSF-TNFIFGDSLVDVGNNNYIFTLSKADSSPY
             .: :  .. ::  ..    :.... .::.:::::::.:::::. :::::.  : 
ATFCA5 MSLLVFLC-QIIVLSVLFFSEVC-LAGKKIPANFVFGDSLVDAGNNNYLATLSKANYVPN
                10        20         30        40        50        

            60        70        80        90       100       110   
K16L22 GIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAG
       ::::    :.::::::::::: ::: .:::.    :::: :.: .. : ::.:::::..:
ATFCA5 GIDF----GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSG
       60            70        80        90       100       110    

           120       130       140                   150           
K16L22 ILDDTGLLFRLHQLGGRKFVVVGVGPLGCIPFAR----A-----L---N-----------
       ::..:: ::::.:::.::.::...::.::::: :    :     :   :           
ATFCA5 ILNSTGKLFRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAEPNEVLFLKFYTRV
          120       130       140       150       160       170    

                                             160       170         
K16L22 ---------------LI--P-------------AG-KCSEQVNQVVRGYNMKL-IHSLKT
                      ::  :             :: .:: . :.:.. ::.:: :  .. 
ATFCA5 CVEFELHFHKFLYNRLISDPIGCIPFERESDPMAGYECSVEPNEVAQMYNLKLKIL-VEE
          180       190       200       210       220       230    

      180       190       200       210        220             230 
K16L22 LNNELRSEDYNTTFVYANSYDLFLKLVLNYQLFGLKNADK-PCC------GGYFPPFACF
       :::.:..    . :::.. . .   .. ::. .:... .: :::      :: .:   : 
ATFCA5 LNNNLQG----SRFVYGDVFRIVYDIIQNYSSYGFES-EKIPCCSLVGKVGGLIP---C-
           240           250       260        270       280        

             240       250       260       270       280           
K16L22 KGPNQNSSQAACEDRSKFVFWDAYHPTEAANLIVAKALLDGDQTVATPFNIRYLNDL   
        ::    :.. : ::::.:::: ::::::::.:.:. ::.:: .   :.:.: : .:   
ATFCA5 -GP---PSKV-CMDRSKYVFWDPYHPTEAANIIIARRLLSGDTSDIYPINLRQLANLKIY
              290        300       310       320       330         

ATFCA5 A
     340

Library scan:  0:00:00  total CPU time:  0:00:00