SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K16L22.10 (Universal genetic code) : 387 aa
 vs  library
 searching pri1_human library

    420 residues in     1 sequences
The best scores are:                              s-w
PRI1_HUMAN, 420 bases, EB8 checksum.               (420)1134

>>PRI1_HUMAN, 420 bases, EB8 checksum.               (420 aa)
Smith-Waterman score: 1134;   49.415% identity in 342 aa overlap

                            10        20        30        40       
K16L22              MVVMNCIFVCVCESVDGKHPGCDEYYFGRREFSFTLENDVYLRYKSF
                                        :  . :: .:::::::..:.:.::.::
PRI1_H METFDPTELPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSF
               10        20        30        40        50        60

        50         60        70        80        90       100      
K16L22 KNASLMEAAI-KSNFPYKIDIGAVYSVDPDKRHAYAQSGTNLFTPVERELVFDIDITDYD
       .: : .:  . : : :::::::::::  :.. :  .. :.  :   :.:::::::.::::
PRI1_H NNQSDLEKEMQKMN-PYKIDIGAVYSHRPNQ-HNTVKLGA--FQAQEKELVFDIDMTDYD
               70         80        90          100       110      

        110       120       130       140       150       160      
K16L22 DVRYCCSGADVCSKCWPLMTVAIKVIDTSLREDFGFKHILWVFSGRRGVHCWVCDAKARR
       ::: :::.::.: ::: :::.::..:: .:.::::::: :::.:::::::::::: ..:.
PRI1_H DVRRCCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRK
        120       130       140       150       160       170      

        170       180       190       200       210       220      
K16L22 LTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVDFIKSFFEGELQ-ATQSI
       :..  ::...::. . ::...  ::: : ....:::. .: ...::..:: :   ..:.:
PRI1_H LSSAVRSGIVEYLSLVKGGQDVKKKVHL-SEKIHPFIRKS-INIIKKYFE-EYALVNQDI
        180       190       200        210        220        230   

         230       240       250       260       270        280    
K16L22 FSSKEKYEKILGMITDEDIQADLRGKWENSARSSLSEEATSLLRWEQLKK-ALQSKRN-K
       . .::...:::...  : :. .:. ....: ..::.       :::.::: : . . : :
PRI1_H LENKESWDKILALVP-ETIHDELQQSFQKS-HNSLQ-------RWEHLKKVASRYQNNIK
           240        250       260               270       280    

           290        300       310       320       330       340  
K16L22 ALSLRTCVE-EIVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCVPIDPNNCDEFDP
         .    .: ::.. . .::.:..::: .:::::.:: :::::::. :::: .. :.:::
PRI1_H NDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDP
          290       300       310       320       330       340    

            350       360       370       380                      
K16L22 LAVPTLSQLIEEINSGGLRMDVDDDGMFSNRISVELFWIRVYYHS               
       ..:::.: . .:...                                             
PRI1_H FTVPTISFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEHFLENLDK
          350       360       370       380       390       400    

PRI1_H SRKGELLKKSDLQKDF
          410       420

Library scan:  0:00:00  total CPU time:  0:00:00