Gene organization of K16L22 (79109 bp)
Chromosome V 14-16 Mb   FTP   Reference   Kazusa Status  
Gene organization of K16L22
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K16L22.1
+
1370..3142 1 0 chromosome II BAC T32G6 genomic sequence
K16L22.2
+
19363..22275 7 1 cosmid 62D9
K16L22.3
+
29816..33730 1 0 cytoskeleton-associated protein CIP1
K16L22.4
+
35459..37227 5 0 hypothetical protein homologous to EST B23019
K16L22.5
+
42146..44772 8 0 rab geranylgeranyltransferase alpha subunit (EC 2.5.1.-) (rab ggtase)
K16L22.6
-
45107..46829 3 0 BAC IG005I10
K16L22.7
+
50140..55095 5 0 chromosome II BAC F4L23 genomic sequence
K16L22.8
-
55781..57605 3 0 BAC IG005I10
K16L22.9
-
60162..61703 5 2 chromosome II BAC T11A7 genomic sequence
K16L22.10
+
62713..65122 12 0 DNA primase 49 kD subunit (EC 2.7.7.-) (p49)
K16L22.11
-
65637..68242 5 0 chromosome 4, ESSA I contig fragment No. 5
K16L22.12
+
70374..72906 4 0 BAC T19F06 genomic sequence


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K16L22.P1
+
27..224 1 0 BAC F21E10 [pseudo]
K16L22.P2
+
3228..6736 2 0 chromosome II BAC F4L23 genomic sequence [pseudo]
K16L22.P3
+
9153..10175 3 0 cosmid K06H6
K16L22.P4
+
17647..17838 1 0 BAC F6N23 [pseudo]


transcribed regions

identifier direction position Definition of the most similar sequence

K16L22.T1
+,-
10490..11251 clone GBGe161; 5' end
clone GBGe161; 3' end
K16L22.T2
+
40199..40445 Lambda-PRL2 cDNA clone 127O12T7
Lambda-PRL2 cDNA clone 191I11T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VII. Sequence Features of the Regions of 1,013,767 bp Covered by 16 Physically assigned P1 and TAC Clones (1998) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 297-308
o Kazusa Status