SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K16H17.P2 (Universal genetic code) : 30 aa
 vs  library
 searching gi:3851581 library

    988 residues in     1 sequences
The best scores are:                              s-w
gi|3851581                                         (988) 128

>>gi|3851581                                         (988 aa)
Smith-Waterman score: 128;   63.333% identity in 30 aa overlap

gi|385 METTSLQRKFPEWMSMQSQRCATEEKACVQKSVLEDNLPFLEFPGSIVYSYEASDCSFLS
               10        20        30        40        50        60

gi|385 EDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKM
               70        80        90       100       110       120

gi|385 LLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLG
              130       140       150       160       170       180

                       10        20        30                      
K16H17         LQCSDWSYRPLTEEQKLYAATDAHCLLQIF                      
               ..::.::  ::::.:::::::::.  : :.                      
gi|385 KQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTVQVFALNKAEENL
              190       200       210       220       230       240

gi|385 PLEMKKQLNLISEEMRDLANRFPVTCRNLETLQRVPVILKSISENLCSLRKVICGPTNTE
              250       260       270       280       290       300

gi|385 TRLKPGSSFNLLSSEDSAAAGEKEKQIGKHSTFAKIKEEPWDPELDSLVKQEEVDVFRNQ
              310       320       330       340       350       360

gi|385 VKQEKGESENEIEDNLLREDMERTCVIPSISENELQDLEQQAKEEKYNDVSHQLSEHLSP
              370       380       390       400       410       420

gi|385 NDDENDSSYIIESDEDLEMEMLKSLENLNSDMVEPTHSKWLEMGTNGCLPPEEEDGHGNE
              430       440       450       460       470       480

gi|385 AIKEEQEEEDHLLPEPNAKQINCLKTYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYG
              490       500       510       520       530       540

gi|385 KSLCFQYPPVYTGKIGIVISPLISLMEDQVLQLELSNVPACLLGSAQSKNILGDVKLGKY
              550       560       570       580       590       600

gi|385 RVIYITPEFCSGNLDLLQKLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPL
              610       620       630       640       650       660

gi|385 VPVIALSATASSSIREDIISCLNLKDPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVR
              670       680       690       700       710       720

gi|385 KASSAWEFEGPTIIYCPSRKMTEQVTAELGKLNLACRTYHAGMKISERKDVHHRFLRDEI
              730       740       750       760       770       780

gi|385 QCVVATVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNT
              790       800       810       820       830       840

gi|385 SRNHLIEIHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKC
              850       860       870       880       890       900

gi|385 CDNCRPRLNHCLTANNSEDASQDFGPQAFQLLSAVDILQEKFGIGIPILFLRGSVSVSVI
              910       920       930       940       950       960

gi|385 APGTVSDSAFHCVAMALAFFRWLTSNPC
              970       980        

Library scan:  0:00:00  total CPU time:  0:00:00