SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K16H17.P1 (Universal genetic code) : 49 aa
 vs  library
 searching sp:P41229:X169_HUMAN library

   1560 residues in     1 sequences
The best scores are:                              s-w
sp|P41229|X169_HUMAN                               (1560) 204

>>sp|P41229|X169_HUMAN                               (1560 aa)
Smith-Waterman score: 204;   57.143% identity in 42 aa overlap

sp|P41 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
               10        20        30        40        50        60

sp|P41 DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
               70        80        90       100       110       120

sp|P41 EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
              130       140       150       160       170       180

sp|P41 FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
              190       200       210       220       230       240

sp|P41 AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSH
              250       260       270       280       290       300

                                          10        20        30   
K16H17                            EECSSGKQPAKLLLCDKCDKGFHLFCLRPILVS
                                    :: : .  :::::: :: ..:.::: : :  
sp|P41 SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
              310       320       330       340       350       360

            40                                                     
K16H17 VPKGSWFCPSCSKHQI                                            
       .::: : ::.:                                                 
sp|P41 IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
              370       380       390       400       410       420

sp|P41 VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
              430       440       450       460       470       480

sp|P41 VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
              490       500       510       520       530       540

sp|P41 AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
              550       560       570       580       590       600

sp|P41 YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
              610       620       630       640       650       660

sp|P41 NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
              670       680       690       700       710       720

sp|P41 CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
              730       740       750       760       770       780

sp|P41 LEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGP
              790       800       810       820       830       840

sp|P41 HRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGL
              850       860       870       880       890       900

sp|P41 LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
              910       920       930       940       950       960

sp|P41 APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQ
              970       980       990      1000      1010      1020

sp|P41 ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
             1030      1040      1050      1060      1070      1080

sp|P41 WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
             1090      1100      1110      1120      1130      1140

sp|P41 RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGRL
             1150      1160      1170      1180      1190      1200

sp|P41 QCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
             1210      1220      1230      1240      1250      1260

sp|P41 LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPR
             1270      1280      1290      1300      1310      1320

sp|P41 PEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELLSSL
             1330      1340      1350      1360      1370      1380

sp|P41 LPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIRTLLEL
             1390      1400      1410      1420      1430      1440

sp|P41 EKAERHGSRARGRALERRRRRKVDRGGEGDDPAREELEPKRVRSSGPEAEEVQEEEELEE
             1450      1460      1470      1480      1490      1500

sp|P41 ETGGEGPPAPIPTTGSPSTQENQNGLEPAEGTTSGPSAPFSTLTPRLHLPCPQQPPQQQL
             1510      1520      1530      1540      1550      1560

Library scan:  0:00:00  total CPU time:  0:00:00