SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K15N18.9 (Universal genetic code) : 203 aa
 vs  library
 searching ab000468 library

    190 residues in     1 sequences
The best scores are:                              s-w
AB000468, 190 bases, 1063 checksum.                (190) 258

>>AB000468, 190 bases, 1063 checksum.                (190 aa)
Smith-Waterman score: 258;   26.794% identity in 209 aa overlap

               10        20        30        40        50        60
K15N18 MNTSEVRVPRGNRRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDD
                   :.:..    .:.   :    :. ::  .  : : :  .. ... ::  
AB0004          MSTRKRRG----GAINSRQ----AQKRTREA--T-STPEISL-EAEPIE--
                            10            20           30          

               70        80        90             100         110  
K15N18 VIESSASAFAEAKSKSRNARRRPLMVDVESGGTT------RFPANISNKRRRIPS--SES
       ..:.... ...   .: .    :..::.  . ..      : :    : :: .:.  ..:
AB0004 LVETAGDEIVDLTCESLE----PVVVDLTHNDSVVIVDERRRPR--RNARR-LPQDHADS
        40        50            60        70          80         90

               120       130        140         150                
K15N18 -VI--DCEHASVNDEVNMSSRVSRS-KAPAPPPEEPKFT--CPICMCPFTE--E-----M
        :.  : :. : . .: ..... :. .  .    .:. :  :::::  ..:  .     .
AB0004 CVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYSEIVQNGRLIV
              100       110       120       130       140       150

     160       170       180       190       200   
K15N18 STKCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLPTTR
       ::.:::.::. :.. ...  . :::::::.. :   : . :   
AB0004 STECGHVFCSQCLRDSLKNANTCPTCRKKINHK---R-YHPIYI
              160       170       180           190

Library scan:  0:00:00  total CPU time:  0:00:00