SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K15N18.11 (Universal genetic code) : 321 aa
 vs  library
 searching af0589144 library

    211 residues in     1 sequences
The best scores are:                              s-w
AF0589144, 211 bases, EE6 checksum.                (211) 642

>>AF0589144, 211 bases, EE6 checksum.                (211 aa)
Smith-Waterman score: 642;   45.161% identity in 248 aa overlap

               10        20        30        40        50        60
K15N18 MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS
              ...: :...::.:::::::::.::..::. :::.   :.. :::. :::::::
AF0589        MTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS
                      10        20        30        40        50   

               70        80        90       100       110       120
K15N18 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC
         ....:::...:.  ::. ::::.:: ::.:::.::::. .. ::...:::: ..::.:
AF0589 REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC
            60        70        80        90       100       110   

              130       140       150        160       170         
K15N18 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEIL-RNSGTEIGESSSVAVAASEGNIP
       : :.  .  .. ..: :.::.::: ::::::::::: ::.     : :: :.      .:
AF0589 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNN-----EPSS-AL------VP
           120       130       140       150                   160 

     180       190           200       210        220        230   
K15N18 MPNLVATTAPTTT----IYEVGSSSSFAAVANFVNPI-DLQQFRHPAAQHVGLN-EQPQN
           ::  ::::.    . :.::::    :. : . . :  :.     : . :: .:  :
AF0589 ----VA--APTTSSVMPVVEMGSSS----VG-FYDKVRD--QI-----Q-ITLNMKQTTN
                   170       180              190             200  

           240       250       260       270       280       290   
K15N18 LNLNLNQNYNQNQEWFMEMMNHPEQMRYQTEQMGYQFMDDNHHNHIHHQPQEHQHQIHDE
        .:.::.     ..:                                             
AF0589 -DLDLNK-----KQW                                             
                  210                                              

           300       310       320 
K15N18 SSNALDAANSSSIIPVTSSSITNKTWFH

Library scan:  0:00:00  total CPU time:  0:00:00