SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K15N18.10 (Universal genetic code) : 112 aa
 vs  library
 searching ae0006994 library

   1156 residues in     1 sequences
The best scores are:                              s-w
AE0006994, 1156 bases, 1AD7 checksum.              (1156) 163

>>AE0006994, 1156 bases, 1AD7 checksum.              (1156 aa)
Smith-Waterman score: 163;   37.143% identity in 105 aa overlap

AE0006 MEKRAYIEKIVVEGFKSYGTKRKEIPLGEGFIAVVGPNGAGKSNIGDAISFALGLSSAKA
               10        20        30        40        50        60

AE0006 LRAKNLSYLIFSKNGQKADHAYVEVHFKNLGAFPVEDEEVVISRKVSKDGRSIFKINGQV
               70        80        90       100       110       120

AE0006 VRERDLKDFLAKAGIYETAYNVVYQGDIVKFLKMTPVERRKIIEEISGIGEYERKKEKAL
              130       140       150       160       170       180

AE0006 EELAEVELKIKEIDLILEEISNQLKRLKEEKEKLEKFKELQRIKRETEAKILLKEKEKLL
              190       200       210       220       230       240

AE0006 KERERILNELSSLRESLEDITFQIQENEKELNERERLLKEVNEKIMPFKEKVGKFTAEIE
              250       260       270       280       290       300

                                         10        20        30    
K15N18                           MHHYLRKLINLRSNVGSSKEELEQLQKERTELKE
                                          ::. .::. . :::.:..:   :::
AE0006 NAERSIKEKERELKESENRVKNLEELINNLLSDKENLEREVGTLQLELEKLKEEYKSLKE
              310       320       330       340       350       360

            40        50         60         70        80        90 
K15N18 KE-EKASKEIKQLQVKLSSIT-ERLKKAETESKEK-EKKLETAETHVTALQKQSAELLLE
        : ::  .:... . .:. :: ...:: : : :::  .::.. . .   :. : :.:  .
AE0006 VEREKL-RELEEEEERLK-ITFDEVKKLEEE-KEKLTEKLNSLNKEKQELEIQRANLKNK
               370        380        390       400       410       

             100       110                                         
K15N18 YDRLLEDNQHLQSQILGKTKS                                       
        .:. :: ..: :.   : :                                        
AE0006 IERIKEDINKLISEREEKIKEIKEKEQEIKRLKAIKKKEEEELRNLTQELNIYEKRLSEV
       420       430       440       450       460       470       

AE0006 RKKLEEVLKEKGAIEREVRSFSDVSDVFKDIKGVYGSVSELIRVKNPEHITAIEVAGGGR
       480       490       500       510       520       530       

AE0006 LKFIVVEDEEVAKECIQLAKRMNLGRFSFIPLNRVRVEERPLRYPRTKGAVDFAVNLVEY
       540       550       560       570       580       590       

AE0006 DPKFEKVVKFVFGDTLIVENFESAKAIGIGNYRMVTLEGELFEKSGVITGGAVKPSGELN
       600       610       620       630       640       650       

AE0006 KRYYEEELQRLNAEEEKLKNEESIIQKKIREIRNLISEKTALLKVSERKIEELSSEGLEQ
       660       670       680       690       700       710       

AE0006 YEEKFKEKLENSKEYLKILEEKLLNVEDKLKELAEEIEYYEEKLNNLKLKEGDIKRHYSR
       720       730       740       750       760       770       

AE0006 EGVEEKRREYSKVRKQVSEIEKSLNEIERELNKKTYELEYLEKEIQEKEREREYLTERIK
       780       790       800       810       820       830       

AE0006 SLKKEIENLILFKEKTLQEVKEAEVKVYDYIKQKEELEKEILNLKSKLGKLKIKEEELKE
       840       850       860       870       880       890       

AE0006 KIFEKEKNLKVLEEKIENLNEELKEYEDLKLGADEESIPKLKEKLKRVTEEIQKLGSVNF
       900       910       920       930       940       950       

AE0006 RAEEDYAEELKRFNDYKEKQQKLKEESKAIKKLIEETENKKRKVFLEAFNQINKSLKRIF
       960       970       980       990      1000      1010       

AE0006 SFLSPGGKAQMFLDNPEDPFSGGVQLTVKPRGKDVQYLEAMSGGEKTLAALSLIFALQEY
      1020      1030      1040      1050      1060      1070       

AE0006 KPSPFYYFDEVDAHLDEVNAKKVGELIREKSKEAQFIVVTLREVVTSFADKIVGVSARGG
      1080      1090      1100      1110      1120      1130       

AE0006 ISEVFFLKNEGLEEIIKEA
      1140      1150      

Library scan:  0:00:00  total CPU time:  0:00:00