Links
Arabidopsis thaliana links



AGI: The Arabidopsis Genome Initiative

o AtDB's AGI general information

o The SPP Consortium (Chromosome 1)
Stanford DNA Sequence & Technology Center, Stanford University
The Arabidopsis thaliana Genome Center (ATGC), the University of Pennsylvania
Plant Gene Expression Center, University of California, Berkeley
o The TIGR Arabidopsis thaliana Database (Chromosome 2 and BAC ends)
The Institute for Genomic Research (TIGR)
o Kazusa Status: The Kazusa Arabidopsis data Opening Site (Chromosome 3 and 5)
Kazusa DNA Research Institute
o GENOSCOPE: Centre National de Séquençage (BAC ends)
o MIPS - Arabidopsis thaliana genome project (Chromosomes 4)
John Innes Centre (JIC)
Munich Information Centre for Protein Sequences (MIPS)
o CSHL - Wash.U - ABI (Chromosomes 4 and 5)
Lita Annenberg Hazen Genome Center, Cold Spring Harbor Laboratory (CSHL)
Washington University School of Medicine Genome Sequencing Center


Genome Research Project

o Multinational Coordinated Arabidopsis thaliana Genome Research Project: Year Five


Information Center

o AtDB: Arabidopsis thaliana Database
o Arabinet Mass. Gen. Hospital


Stock Center

o AIMS: Arabidopsis Information Management System
o NASC: Nottingham Arabidopsis Stock Centre


cDNA/EST project

o cDNA Sequence Analysis Project
o The TIGR Arabidopsis thaliana EST Assembly Database


Protein Coding Region / Splice Site Finding

o Multiple Gene Modeling Software is under construction (Univ. of Tokyo and Kazusa)
o Genefinder
o GeneMark
o GenLang
o Grail
o GENSCAN
o NetPlantGene server
o AraClean v1.1 (cleaning the GenBank Arabidopsis thaliana data set)


On-line Journal

o Weeds World: The International Electronic Arabidopsis Newsletter
o Weeds World: The International Electronic Arabidopsis Newsletter


Other Resources

o LEHLE SEEDS Home Page
o ATCG
o Arabidopsis thaliana Codon usage table


o Kazusa Status