information on T3E15
(99110..99646)
Direction: +
Frame: 2
ORF
98957..99646 (Met: 98975 99029 99077 99155 99626 99194 99223 99309)
AYCYKVMPFGLKNAGATYQRLVNRMFADQLGKTIEVYIDDMLVKSAREKEHVQQLRECFK
ILNKFEMKLNPEKCSFRVP*RIPRIPSN*EASRPILSRLQPSSTCHRQKRHGRSNV*GRI
AALNRFISRCTDKCVPFYQLLRKDKKFDWNEDCEQAIKQLKAYLSEPPILAKPEEGEPLY
LYTAVSRTAISGVLVREDHEGQKPIYYVSKTLIDAETRYPAMEKLALA
GenBank annotation
None
BLASTX cluster
93864..101553 cluster 33 75 hits for protein gene
BLASTN cluster
None
GENSCAN
93864..101613 gene model 26
73825..76313 gene model 20
Suboptimal exon
99219..99594 Intr Phase: 1 Score: 0.186
99219..99646 Term Phase: 1 Score: 0.155
Grail
Shadow exon
98975..99047 exon Phase: 0 Score: 21
Exon-Intron boundary candidatates
Acceptor |
99028 [0.035] (2) |
99048 [0.005] (1) |
99187 [0.011] (2) |
99254 [0.087] (0) |
99261 [0.016] (1) |
99349 [0.006] (2) |
99380 [0.014] (0) |
99447 [0.001] (1) |
99516 [0.004] (1) |
99603 [0.002] (1) |
Donor |
98971 [0.016] (0) |
99047 [0.196] (1) |
99087 [0.029] (2) |
99298 [0.004] (0) |
99336 [0.99N/0.819] (2) |
99348 [0.116] (2) |
99544 [0.380] (0) |
99583 [0.019] (0) |
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