information on T3E15    (98332..98961)

Direction: +

Frame: 1

ORF

    98323..98967  (Met: 98335 98389 98581 98683 98728 98752 98844 98782 98913 98954)
TFRIMIKTGSSVDVLFYEAFKKMGHLDSELQGRKTPLTGFAGDTTFSLGTIQLPTVARGV
RRLTSFLVVDKKAPFNAILGRPWLHAMKAVPSTYHQCVKFPSDKGIAVVYDSQRSSRKCY
MGSYELIKKVDPVVLMIEDKLTKMKIVRSSDPS*QTSKTVDNTGLHRRIRSQTMLWDRSR
PRPSDTRGSHNLSQRK*TASPGQVRTSEE*LLL

GenBank annotation

    None

BLASTX cluster

    93864..101553    cluster 33    75 hits for protein gene

BLASTN cluster

    None

GENSCAN

    93864..101613    gene model 26
    71363..70573    gene model 19
    Suboptimal exon

        98344..98718    Intr    Phase: 0    Score: 0.260
        98344..98781    Term    Phase: 0    Score: 0.130

Grail


    Shadow exon

        98815..98963    exon    Phase: 0    Score: 50

Exon-Intron boundary candidatates

Acceptor
98377 [0.001] (0) 98468 [0.076] (1) 98479 [0.002] (0) 98645 [0.002] (1)
98691 [0.002] (2) 98766 [0.007] (2) 98785 [0.003] (0) 98790 [0.92N/0.223] (2)
98815 [0.065] (0) 98834 [0.003] (1) 98858 [0.095] (1) 98922 [0.002] (2)
Donor
98438 [0.078] (2) 98499 [0.004] (0) 98814 [0.013] (0) 98857 [0.004] (1)
98935 [0.005] (1)

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