information on T3E15    (94804..95031)

Direction: +

Frame: 1

ORF

    94447..95050  (Met: 94558 94753 94795 94804 94816 94870 94999 95025)
VAFLQAPANALVKNLATGNETSTTPAFPRLPVPTLLSMGCSPPRYTWTRNQTTASSSRIP
GSSTQQQTSIANPPSVSRIPGSDLLNSPTDPQAPVDPHNVVDMETFRNYAAQTNANMAQM
HSRMHLAVSDAPDIDRVIEDTMRTLFTNRIARFCLRDVGRLRFPEYDGTSDPKAHLRSFR
FAIT*VPDRRRK*QVIAVSS

GenBank annotation

    None

BLASTX cluster

    93864..101553    cluster 33    75 hits for protein gene
    94957..95262    cluster 32    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    93864..101613    gene model 26
    Suboptimal exon

        94447..94998    Term    Phase: 0    Score: 0.285
        94462..94998    Term    Phase: 0    Score: 0.580

Grail


    Shadow exon

        94499..95001    exon    Phase: 1    Score: 89

Exon-Intron boundary candidatates

Acceptor
94447 [0.083] (0) 94462 [0.747] (0) 94499 [0.019] (1) 94578 [0.022] (2)
94688 [0.032] (1) 94707 [0.003] (2) 94778 [0.003] (1) 94829 [0.002] (1)
94893 [0.006] (2) 95033 [0.048] (1)
Donor
94577 [0.051] (2) 94728 [0.006] (0) 94827 [0.005] (0) 94940 [0.006] (2)
95032 [0.200] (1)

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