information on T3E15    (80952..80671)

Direction: -

Frame: 1

ORF

    80991..80416  (Met: 80961 80925 80910 80766 80727 80697 80580 80484)
YSKILIVCLCMKFQELDDEEQPMQPKRMFFSPSEYVKTCKIGTRCTVQQTVKYLEEFKED
LPWFKAHPQFRHVFHMPEEKNHKTQGLWMLLLRTAQTEMDRECWFVVNGVPIRYSIKEHA
LLCGFDCHDYPEELQPSMKIVDADLKFAKKIFKKVSGIKIVDVAKKLDEMKKCEEKKKTD
RKKLAILLFCAR

GenBank annotation

    None

BLASTX cluster

    82428..78804    cluster 29    6 hits for protein gene

BLASTN cluster

    None

GENSCAN

    83311..78774    gene model 22
    Suboptimal exon

        80949..80417    Intr    Phase: 0    Score: 0.216

Grail

    80949..80413    exon    Phase: 0    Score: 89

Exon-Intron boundary candidatates

Acceptor
80416 [0.043] (2) 80453 [0.001] (1) 80529 [0.007] (0) 80708 [0.005] (1)
80779 [0.025] (2) 80796 [0.018] (0) 80867 [0.001] (1) 80899 [0.001] (2)
80919 [0.004] (0) 80949 [1.00N/0.692] (0)
Donor
80417 [0.014] (2) 80530 [0.242] (0) 80583 [0.018] (1) 80654 [0.99N/0.490] (2)
80674 [0.040] (0) 80681 [0.371] (2) 80837 [0.005] (2) 80877 [0.076] (1)
80974 [0.004] (0)

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