information on T3E15    (74806..75081)

Direction: +

Frame: 1

ORF

    73813..75264  (Met: 73825 73945 74404 74644 74746 74925 74954 75118 75172 74866 74949 75011)
LQETMKNKHTFIQFDNGYYSEEHEWISNNSLSGVLLSTSKVTYSMLVEKICKKIGIDETS
RKVKLSYILCTSQRQTSIVDDDAFLSYLTVVNAKRIRPALNVEVVNKESERVEQISRVER
RSSVGVNYEELNAFDVENGGVVTIFRGETAGGNCVNDEPIIEEANSVEEAIENADSRVFE
EAIENVVIEDREHVDSRMDVAEDNGVDGRIEYYELPCVGEGSQSSEKSQSVTEWEDGTGI
ELHQEFVSKEAVQDLVKRAANKYCFATTTIASDPQRLMLRCRQSKTTGCRWYLRCAKVKS
SDCFSVRVHRKMHTCKRSNKNSGNGKHTDTPRLIASILHEDYPGEFQTPPP*HNEYCSGK
NGFALLVCYRMEREKTTR*MCVVVLRKATPTCTLTCTY*EVNPGTISYVEVDAQQKFKYL
FVALGACIEGFKVMRKVVIVDATFLKTVYGGMLVFATAQDPNHHNYIIASAVIDRENDAS
WS

GenBank annotation

    None

BLASTX cluster

    73825..78340    cluster 28    28 hits for protein gene

BLASTN cluster

    None

GENSCAN

    73825..76313    gene model 20
    Suboptimal exon

        73825..74865    Sngl    Phase: 0    Score: 0.761

Grail

    73825..74868    exon    Phase: 0    Score: 99
    74896..75263    exon    Phase: 0    Score: 85

Exon-Intron boundary candidatates

Acceptor
73819 [0.96N/0.996] (0) 73874 [0.006] (1) 73933 [0.002] (0) 73955 [0.025] (1)
73960 [0.001] (0) 74051 [0.001] (1) 74084 [0.002] (1) 74103 [0.004] (2)
74108 [0.008] (1) 74122 [0.004] (0) 74222 [0.065] (1) 74250 [0.004] (2)
74264 [0.004] (1) 74315 [0.002] (1) 74354 [0.002] (1) 74363 [0.001] (1)
74372 [0.002] (1) 74381 [0.007] (1) 74385 [0.017] (2) 74474 [0.041] (1)
74482 [0.007] (0) 74630 [0.004] (1) 74675 [0.002] (1) 74717 [0.008] (1)
74727 [0.009] (2) 74733 [0.187] (2) 74735 [0.004] (1) 74742 [0.96N/0.619] (2)
74780 [0.002] (1) 74843 [0.026] (1) 75016 [0.003] (0) 75107 [0.002] (1)
75157 [0.003] (0) 75191 [0.001] (1) 75243 [0.040] (2)
Donor
73862 [0.017] (2) 73932 [0.338] (0) 73998 [0.99N/0.114] (0) 74121 [0.025] (0)
74124 [0.003] (0) 74163 [0.013] (0) 74266 [0.785] (1) 74343 [0.008] (0)
74434 [0.018] (1) 74674 [0.176] (1) 74684 [0.443] (2) 74703 [0.012] (0)
74785 [0.301] (1) 74842 [0.88N/0.705] (1) 74946 [0.029] (0) 74955 [0.003] (0)
74962 [0.012] (1) 75018 [0.033] (0) 75071 [0.016] (2) 75169 [0.066] (1)
75231 [0.015] (0) 75263 [0.74N/0.010] (2)

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