information on T3E15    (71402..70914)

Direction: -

Frame: 2

ORF

    71408..70686  (Met: 71366 71363 71354 71330 71138 71093 71045 71012 70802)
IFNKKLRELWNPKGMMTVMDLPRQFFMIRFELQEEYLAALTGDPWRVFGSNLTVQAWLPE
FDPLRDVIATTPVWIRLTNVPVNFYHPSILMSIAGGLGKPFKVDTMTLNHERARFARVCV
EMNLAKPLKGTIMVNGDRYYVAYEGLTNICSTCGLYGHLVHTCPRVVQEQSKEGPRTDVS
EGPRDFSQGVPKKNQSGNDGFTMVRRPSRKPENRPEKPSKLVVLGAGSSGPGLGRNLKEI
R

GenBank annotation

    None

BLASTX cluster

    71022..71210    cluster 24    1 hits for protein gene
    71025..71276    cluster 25    1 hits for protein gene
    70914..71402    cluster 26    1 hits for protein gene
    70917..71408    cluster 27    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    71363..70573    gene model 19

Grail

    71012..70683    exon    Phase: 0    Score: 86
    71366..70683    exon    Phase: 0    Score: 52

Exon-Intron boundary candidatates

Acceptor
70782 [0.009] (2) 70794 [0.205] (2) 70844 [0.134] (0) 70864 [0.001] (1)
70898 [0.003] (0) 70914 [0.022] (2) 70995 [0.006] (2) 71020 [0.001] (1)
71035 [0.001] (1) 71047 [0.009] (1) 71125 [0.92N/0.614] (1) 71284 [0.188] (1)
71296 [0.003] (1) 71309 [0.504] (0) 71322 [0.224] (2) 71356 [0.004] (1)
71369 [0.016] (0) 71396 [0.009] (0)
Donor
70687 [0.96N/0.308] (2) 70715 [0.676] (1) 70746 [0.012] (0) 70865 [0.067] (1)
70875 [0.892] (0) 70976 [0.017] (1) 70996 [0.408] (2) 71117 [0.043] (1)
71166 [0.92N/0.057] (0) 71193 [0.013] (0) 71211 [0.004] (0) 71323 [0.076] (2)
71342 [0.007] (1)

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