information on T3E15
(60558..60695)
Direction: +
Frame: 3
ORF
59865..60767 (Met: 59922 59970 60216 60315 60348 60393 60600 60627)
NINLKAVLLLTISDFPAFSMLSGWTTHDKLSCPVCMESTKSFSLPNGRKTCWFDCHCRFL
PHGHPSRRNRKDFVKGREVSSEYPPESLTGKQVYYEWLASVNPPKTKDVGGNGHEKKMLG
YGKEHNWHKESILWELSYWKDLNLRHIIDVMHTEKNFLDNIMNTLLRVKDKSKDNIMSRL
DIEKFCSRPGLHIDSNGKAPFPTYSLTDEAKQSLFQCVKHDVRFPDGYSSDLASCVDLEN
GKFSGMKSHDCHVFMERLLPFIFAELLDRNVHLALSGTVLTILFANIFLSNYLTCTYILG
I
GenBank annotation
None
BLASTX cluster
58563..62361 cluster 21 22 hits for protein gene
BLASTN cluster
None
GENSCAN
58560..66103 gene model 17
Suboptimal exon
60068..60693 Intr Phase: 2 Score: 0.422
Grail
59970..60698 exon Phase: 0 Score: 86
Exon-Intron boundary candidatates
| Acceptor |
| 59884 [0.022] (1) |
59903 [0.004] (2) |
59921 [0.001] (2) |
59932 [0.031] (1) |
| 59965 [0.133] (1) |
60038 [0.011] (2) |
60068 [0.012] (2) |
60074 [0.002] (2) |
| 60133 [0.167] (1) |
60285 [0.001] (0) |
60325 [0.014] (1) |
60433 [0.023] (1) |
| 60449 [0.002] (2) |
60487 [0.061] (1) |
60541 [0.86N/0.114] (1) |
60554 [0.003] (2) |
| 60574 [0.082] (1) |
60580 [0.002] (1) |
60598 [0.041] (1) |
60694 [0.002] (1) |
| 60763 [0.493] (1) |
| Donor |
| 60019 [0.009] (2) |
60164 [0.004] (0) |
60453 [0.93N/0.005] (1) |
60472 [0.86N] (2) |
| 60527 [0.003] (0) |
60543 [0.007] (1) |
60693 [1.00N/0.927] (1) |
60698 [0.202] (0) |
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Entrance