information on T3E15
(44023..44310)
Direction: +
Frame: 1
ORF
44023..44646 (Met: 44044 44056 44293 44305)
SVAERLGMTNYMPTRITLLFADRSKRIPEGIFEDVPVKVGNSVIPADFVVLDYEKEPKDP
LILERAFLATADARFDVKRGRISLKVYDLEMKFGMDGSELTKTISSIDSSTYTPSKTAQN
PTTEPHTTLQSAQLANESCNATGSIDTTTHVDRHPRDSQTEGSAQPLQPTPLQALCDKFS
SISSPALPSTNSLDSSKSASQDNKPRVL
GenBank annotation
None
BLASTX cluster
33209..45210 cluster 12 56 hits for protein gene
BLASTN cluster
None
GENSCAN
43192..50804 gene model 15
Suboptimal exon
44044..44506 Init Phase: 0 Score: 0.443
44044..44640 Init Phase: 0 Score: 0.140
Grail
44044..44649 exon Phase: 0 Score: 70
Exon-Intron boundary candidatates
| Acceptor |
| 44042 [0.015] (1) |
44137 [0.002] (0) |
44188 [0.003] (0) |
44217 [0.001] (2) |
| 44293 [0.001] (0) |
44318 [0.010] (1) |
44352 [0.002] (2) |
44380 [0.019] (0) |
| 44393 [0.005] (1) |
44450 [0.143] (1) |
44500 [0.002] (0) |
44603 [0.008] (1) |
| Donor |
| 44136 [0.076] (0) |
44140 [0.011] (1) |
44243 [0.127] (2) |
44260 [0.065] (1) |
| 44277 [0.097] (0) |
44548 [0.010] (1) |
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