information on T3E15
(41408..41163)
Direction: -
Frame: 2
ORF
41615..41109 (Met: 41555 41441 41243 41165 41144)
KGIFFLIDSFTSSASDSISEMELEDPLERVLVSSIEDSADLDNETSTYTKLLDETEHAMQ
LIIEEDFPSVTPTPTTNSDWDPAKAPKIDLKTLPAGLRYAFLGENSTYPVIVNASLNPAE
LTLLMSKLRNHRKAVGYSLDDIACISPDVCMIGTTLRMSLSLQLNFRED
GenBank annotation
None
BLASTX cluster
41220..37494 cluster 13 16 hits for protein gene
44376..41390 cluster 16 9 hits for protein gene
BLASTN cluster
None
GENSCAN
42713..39087 gene model 14
Suboptimal exon
41555..41172 Init Phase: 0 Score: 0.271
41569..41172 Intr Phase: 1 Score: 0.186
41593..41172 Intr Phase: 1 Score: 0.170
Grail
41575..41106 exon Phase: 1 Score: 85
Exon-Intron boundary candidatates
| Acceptor |
| 41126 [0.002] (0) |
41158 [0.005] (1) |
41257 [0.86N/0.090] (1) |
41368 [0.006] (1) |
| 41497 [0.010] (1) |
41555 [0.001] (0) |
41557 [0.90N/0.498] (1) |
41569 [0.108] (1) |
| 41575 [0.114] (1) |
41593 [0.045] (1) |
| Donor |
| 41172 [0.006] (0) |
41222 [0.009] (1) |
41323 [1.00N/0.989] (2) |
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Entrance