information on T3E15
(39391..39299)
Direction: -
Frame: 3
ORF
39799..39173 (Met: 39739 39688 39475 39472 39217 39190)
SLVTEVSISLTRFLRNCFFNMEFNIELLLPTIHKRADMLRFPTCRSKRFLRRQWENKKKE
WSYKLDDALWAYRTAFKTPLGTTPFHLLYGKACYLPVELEQKAAWAVKMMNFNIKSAGER
RLIQLNEVDEIQIHAYNNSKLYKERTKAYHDKKILTRTFEPNDQVILYDSILTLFPGKLS
SRWSGPTQSIRLDRMKPTFLQITMEDHLL
GenBank annotation
None
BLASTX cluster
41220..37494 cluster 13 16 hits for protein gene
BLASTN cluster
None
GENSCAN
42713..39087 gene model 14
27339..25140 gene model 11
Suboptimal exon
39525..39220 Intr Phase: 1 Score: 0.218
Grail
39739..39170 exon Phase: 0 Score: 92
Exon-Intron boundary candidatates
Acceptor |
39196 [0.032] (0) |
39235 [0.005] (0) |
39246 [0.86N/0.770] (1) |
39370 [0.001] (0) |
39379 [0.003] (0) |
39427 [0.003] (0) |
39489 [0.004] (1) |
39496 [0.317] (0) |
39501 [0.008] (1) |
39525 [0.005] (1) |
39576 [0.010] (1) |
39581 [0.008] (2) |
39603 [0.006] (1) |
39665 [0.003] (2) |
39733 [0.002] (0) |
Donor |
39220 [0.051] (1) |
39228 [0.015] (2) |
39308 [1.00N/0.744] (0) |
39532 [0.011] (1) |
39681 [0.016] (2) |
39785 [0.977] (0) |
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Entrance