information on T3E15    (34128..34463)

Direction: +

Frame: 3

ORF

    34071..34641  (Met: 34158 34308 34471 34579 34239 34262 34282 34422 34451)
EYQRDCPHHGFSEVQLLGTFFRGVGWRYQMALDAASNGNFNTRYPADAIALIENIA*QQY
QEC*LRGRN*GAVSGNQMAEVKGKLDSVHNLLTGKKHVHFAVEDETIEPETESEE*LLHR
WSGL*SLGSHMATLVATGLQGTSVPPTTLQSLLSRRHFLRATSRGLMVIQLTKPPSTLIR
DKNGIYA

GenBank annotation

    None

BLASTX cluster

    33209..45210    cluster 12    56 hits for protein gene

BLASTN cluster

    None

GENSCAN

    33326..34918    gene model 12
    Suboptimal exon

        34357..34420    Intr    Phase: 1    Score: 0.270

Grail

    34071..34182    exon    Phase: 0    Score: 39
    34357..34420    exon    Phase: 1    Score: 29

Exon-Intron boundary candidatates

Acceptor
34071 [0.007] (0) 34106 [0.006] (2) 34136 [0.062] (2) 34158 [0.015] (0)
34219 [0.001] (1) 34228 [0.002] (1) 34300 [0.052] (1) 34315 [0.009] (1)
34324 [0.002] (1) 34357 [0.066] (1) 34381 [0.018] (1) 34438 [0.031] (1)
34446 [0.037] (0) 34454 [0.043] (2) 34467 [0.006] (0) 34493 [0.049] (2)
34501 [0.068] (1) 34560 [0.003] (0) 34591 [0.200] (1)
Donor
34109 [0.031] (0) 34122 [0.007] (1) 34182 [0.642] (1) 34316 [0.008] (0)
34323 [0.950] (1) 34420 [0.013] (2) 34492 [0.044] (2) 34581 [0.018] (1)

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