information on T3E15
(34017..34439)
Direction: +
Frame: 3
ORF
33825..34450 (Met: 34308 34068 34106 34165 34239 34262 34282 34422)
ASKLVVSEDNLLCKLFPYSLAGEAASWLEQFKATSLKTWRSIKIAFLNNFCDDAKSKELR
NKFSTFTQGPAEALKAAWVRF*IPTRLPTSWFQ*YNFLVPSSEESVGDTRWL*AASNGNF
NTRYPADAIALIENIA*QQYQEC*LRGRN*GAVSGNQMAEVKGKLDSVHNLLTGKKHVHF
AVEDETIEPETESEE*LLHRWSGL
GenBank annotation
None
BLASTX cluster
33209..45210 cluster 12 56 hits for protein gene
BLASTN cluster
None
GENSCAN
33326..34918 gene model 12
Suboptimal exon
33936..34058 Intr Phase: 0 Score: 0.160
34357..34420 Intr Phase: 1 Score: 0.270
Grail
34071..34182 exon Phase: 0 Score: 39
34357..34420 exon Phase: 1 Score: 29
Exon-Intron boundary candidatates
| Acceptor |
| 33847 [0.004] (1) |
34071 [0.007] (0) |
34106 [0.006] (2) |
34136 [0.062] (2) |
| 34158 [0.015] (0) |
34219 [0.001] (1) |
34228 [0.002] (1) |
34300 [0.052] (1) |
| 34315 [0.009] (1) |
34324 [0.002] (1) |
34357 [0.066] (1) |
34381 [0.018] (1) |
| 34438 [0.031] (1) |
34446 [0.037] (0) |
| Donor |
| 34058 [0.035] (0) |
34109 [0.031] (0) |
34122 [0.007] (1) |
34182 [0.642] (1) |
| 34316 [0.008] (0) |
34323 [0.950] (1) |
34420 [0.013] (2) |
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Entrance