information on T3E15    (21362..21439)

Direction: +

Frame: 2

ORF

    21113..21912  (Met: 21128 21164 21194 21206 21371 21592 21742 21829 21428)
PHPETMERLGIYDDVDYMFKQCSLNIHMFQPMEGYEEETIQFLSSVELFLYGESEDDRIR
PDGNLGYLEFCVYEVEYRLLIEHLELMYGFPSGKDTSHRFDKREL*ILATLGSKHEFSSS
RTKSNEIRSPVVRYFHRSLASALFARERNGTFVNGELELMETVLQELLGLASYGTVLAGD
QTNALVSFYLIEHLLSYRGWAKGFKKPGRMVVGGVVTLILRACNVPLHSKPIPPRWIDMQ
HLINSKSFWSQKKNGLYKYRFDHPAA

GenBank annotation

    None

BLASTX cluster

    10572..22307    cluster 6    44 hits for protein gene

BLASTN cluster

    None

GENSCAN

    20636..24730    gene model 10

Grail

    20636..21112    exon    Phase: 0    Score: 70
    21159..21430    exon    Phase: 1    Score: 53

Exon-Intron boundary candidatates

Acceptor
21159 [0.001] (1) 21176 [0.028] (0) 21181 [0.034] (2) 21203 [0.023] (0)
21276 [0.003] (1) 21292 [0.010] (2) 21339 [0.007] (1) 21366 [0.002] (1)
21477 [0.132] (1) 21525 [0.011] (1) 21533 [0.003] (0) 21602 [0.002] (0)
21610 [0.005] (2) 21641 [0.014] (0) 21708 [0.136] (1) 21868 [0.464] (2)
21871 [0.001] (2) 21894 [0.576] (1)
Donor
21213 [0.136] (2) 21323 [0.003] (1) 21327 [0.007] (2) 21504 [0.008] (2)
21507 [0.086] (2) 21524 [0.033] (1) 21634 [0.011] (0) 21893 [0.016] (1)

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