information on T3E15
(21275..21439)
Direction: +
Frame: 2
ORF
21113..21912 (Met: 21128 21164 21194 21206 21371 21592 21742 21829 21428)
PHPETMERLGIYDDVDYMFKQCSLNIHMFQPMEGYEEETIQFLSSVELFLYGESEDDRIR
PDGNLGYLEFCVYEVEYRLLIEHLELMYGFPSGKDTSHRFDKREL*ILATLGSKHEFSSS
RTKSNEIRSPVVRYFHRSLASALFARERNGTFVNGELELMETVLQELLGLASYGTVLAGD
QTNALVSFYLIEHLLSYRGWAKGFKKPGRMVVGGVVTLILRACNVPLHSKPIPPRWIDMQ
HLINSKSFWSQKKNGLYKYRFDHPAA
GenBank annotation
None
BLASTX cluster
10572..22307 cluster 6 44 hits for protein gene
BLASTN cluster
None
GENSCAN
20636..24730 gene model 10
Grail
20636..21112 exon Phase: 0 Score: 70
21159..21430 exon Phase: 1 Score: 53
Exon-Intron boundary candidatates
Acceptor |
21159 [0.001] (1) |
21176 [0.028] (0) |
21181 [0.034] (2) |
21203 [0.023] (0) |
21276 [0.003] (1) |
21292 [0.010] (2) |
21339 [0.007] (1) |
21366 [0.002] (1) |
21477 [0.132] (1) |
21525 [0.011] (1) |
21533 [0.003] (0) |
21602 [0.002] (0) |
21610 [0.005] (2) |
21641 [0.014] (0) |
21708 [0.136] (1) |
21868 [0.464] (2) |
21871 [0.001] (2) |
21894 [0.576] (1) |
Donor |
21213 [0.136] (2) |
21323 [0.003] (1) |
21327 [0.007] (2) |
21504 [0.008] (2) |
21507 [0.086] (2) |
21524 [0.033] (1) |
21634 [0.011] (0) |
21893 [0.016] (1) |
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Entrance